Structure of yeast RNase MRP holoenzyme
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6w6v
Q-score: 0.489
Perederina A, Li D, Lee H, Bator C, Berezin I, Hafenstein SL, Krasilnikov AS
Nat Commun (2020) 11 pp. 3474-3474 [ DOI: doi:10.1038/s41467-020-17308-z Pubmed: 32651392 ]
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonuclease mrp protein subunit snm1 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonuclease mrp (450 kDa, Complex from Saccharomyces cerevisiae)
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Saccharomyces cerevisiae S288C)
- Ribonuclease mrp protein subunit rmp1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Saccharomyces cerevisiae S288C)
- Rna component of rnase mrp nme1 (108 kDa, RNA from Saccharomyces cerevisiae S288C)
Cryo-EM structure of yeast Ribonuclease MRP
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 7c79
Q-score: 0.402
Lan P, Zhou B, Tan M, Li S, Cao M, Wu J, Lei M
Science (2020) 369 pp. 656-663 [ DOI: doi:10.1126/science.abc0149 Pubmed: 32586950 ]
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Ribonuclease mrp protein subunit snm1 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease mrp rna subunit nme1 (108 kDa, RNA from Saccharomyces cerevisiae S288C)
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- Ribonuclease mrp (Complex from Saccharomyces cerevisiae)
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease mrp protein subunit rmp1 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of yeast Ribonuclease MRP with substrate ITS1
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7c7a
Q-score: 0.404
Lan P, Zhou B, Tan M, Li S, Cao M, Wu J, Lei M
Science (2020) 369 pp. 656-663 [ DOI: doi:10.1126/science.abc0149 Pubmed: 32586950 ]
- Zinc ion (65 Da, Ligand)
- Ribonuclease mrp protein subunit snm1 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease mrp with substrate its1 (Complex from Saccharomyces cerevisiae)
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Internal transcribed spacer 1 (6 kDa, RNA from Saccharomyces cerevisiae)
- Ribonucleases p/mrp protein subunit pop3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease mrp rna subunit nme1 (108 kDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease mrp protein subunit rmp1 (23 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of yeast Ribonuclease P
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 6agb
Q-score: 0.311
Lan P, Tan M, Zhang Y, Niu S, Chen J, Shi S, Qiu S, Wang X, Peng X, Cai G, Cheng H, Wu J, Li G, Lei M
Science (2018) 362 [ DOI: doi:10.1126/science.aat6678 Pubmed: 30262633 ]
- Rnase p (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Ribonuclease p protein subunit rpr2 (16 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop3 (22 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p rna (118 kDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
Resolution: 3.48 Å
EM Method: Single-particle
Fitted PDBs: 6ah3
Q-score: 0.259
Lan P, Tan M, Zhang Y, Niu S, Chen J, Shi S, Qiu S, Wang X, Peng X, Cai G, Cheng H, Wu J, Li G, Lei M
Science (2018) 362 [ DOI: doi:10.1126/science.aat6678 Pubmed: 30262633 ]
- Pre-trna (25 kDa, RNA from Saccharomyces cerevisiae S288c)
- Rnase p (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Zinc ion (65 Da, Ligand)
- Ribonuclease p rna (118 kDa, RNA from Baker's yeast)
- Rnase p with pre-trna substrate (Complex)
- Ribonucleases p/mrp protein subunit pop8 (15 kDa, Protein from Baker's yeast)
- Ribonuclease p/mrp protein subunit pop5 (19 kDa, Protein from Baker's yeast)
- Ribonuclease p/mrp protein subunit rpp1 (32 kDa, Protein from Baker's yeast)
- Ribonucleases p/mrp protein subunit pop1 (100 kDa, Protein from Baker's yeast)
- Rnases mrp/p 32.9 kda subunit (32 kDa, Protein from Baker's yeast)
- Ribonuclease p protein subunit rpr2 (16 kDa, Protein from Baker's yeast)
- Pre-trna (Complex from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- Ribonucleases p/mrp protein subunit pop6 (18 kDa, Protein from Baker's yeast)
- Ribonucleases p/mrp protein subunit pop7 (15 kDa, Protein from Baker's yeast)
- Ribonucleases p/mrp protein subunit pop3 (22 kDa, Protein from Baker's yeast)