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sample_name:"SPERMINE" AND xref_links:"interpro" AND author_orcid:"0000-0002-6666-8447"
Release date: Oct. 3, 2018
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 6hiv
Q-score: 0.116
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 6hiv
Q-score: 0.116
Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boehringer D, Schneider A, Ban N
Science (2018) 362 [ DOI: doi:10.1126/science.aau7735 Pubmed: 30213880 ]
Sample:
- Ms34 (22 kDa, Protein from Trypanosoma brucei brucei)
- Unk (613 Da, Protein from Trypanosoma brucei brucei)
- Ml40 (33 kDa, Protein from Trypanosoma brucei brucei)
- Bl20m (24 kDa, Protein from Trypanosoma brucei brucei)
- Ml93 (17 kDa, Protein from Trypanosoma brucei brucei)
- Ms43 (48 kDa, Protein from Trypanosoma brucei brucei)
- Ms35 (98 kDa, Protein from Trypanosoma brucei brucei)
- Bl21m (20 kDa, Protein from Trypanosoma brucei brucei)
- Unk (1 kDa, Protein from Trypanosoma brucei brucei)
- Us8m (32 kDa, Protein from Trypanosoma brucei brucei)
- Bl12m (3 kDa, Protein from Trypanosoma brucei brucei)
- Ml82 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ms57 (45 kDa, Protein from Trypanosoma brucei brucei)
- Us3m (9 kDa, Protein from Trypanosoma brucei brucei)
- Bl32m (9 kDa, Protein from Trypanosoma brucei brucei)
- Unk (4 kDa, Protein from Trypanosoma brucei brucei)
- Ml41 (22 kDa, Protein from Trypanosoma brucei brucei)
- Bl28m (28 kDa, Protein from Trypanosoma brucei brucei)
- Ms69 (21 kDa, Protein from Trypanosoma brucei brucei)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- Ms54 (72 kDa, Protein from Trypanosoma brucei brucei)
- Spermine (202 Da, Ligand)
- Us55m (50 kDa, Protein from Trypanosoma brucei brucei)
- Unk (954 Da, Protein from Trypanosoma brucei brucei)
- Ms29 (57 kDa, Protein from Trypanosoma brucei brucei)
- Uridine 5'-triphosphate (484 Da, Ligand)
- Serine (105 Da, Ligand)
- Ml87 (22 kDa, Protein from Trypanosoma brucei brucei)
- Unk (1 kDa, Protein from Trypanosoma brucei brucei)
- Bs6m (18 kDa, Protein from Trypanosoma brucei brucei)
- Bs12m (23 kDa, Protein from Trypanosoma brucei brucei)
- Ml71 (50 kDa, Protein from Trypanosoma brucei brucei)
- Ms26 (51 kDa, Protein from Trypanosoma brucei brucei)
- Ml38 (58 kDa, Protein from Trypanosoma brucei brucei)
- Ul11m (40 kDa, Protein from Trypanosoma brucei brucei)
- Ms74 (8 kDa, Protein from Trypanosoma brucei brucei)
- Unk (1 kDa, Protein from Trypanosoma brucei brucei)
- Ml75 (39 kDa, Protein from Trypanosoma brucei brucei)
- Ul23m (28 kDa, Protein from Trypanosoma brucei brucei)
- Ms72 (19 kDa, Protein from Trypanosoma brucei brucei)
- Ml78 (35 kDa, Protein from Trypanosoma brucei brucei)
- The complete t. brucei mitoribosome with its small and large subunits (4 MDa, Complex from Trypanosoma brucei brucei)
- Ml84 (24 kDa, Protein from Trypanosoma brucei brucei)
- Unk (15 kDa, Protein from Trypanosoma brucei brucei)
- Ml81 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ml100 (10 kDa, Protein from Trypanosoma brucei brucei)
- Ms37 (24 kDa, Protein from Trypanosoma brucei brucei)
- Unk (3 kDa, Protein from Trypanosoma brucei brucei)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ml67 (93 kDa, Protein from Trypanosoma brucei brucei)
- Ms73 (11 kDa, Protein from Trypanosoma brucei brucei)
- Bl27m (21 kDa, Protein from Trypanosoma brucei brucei)
- Ml46 (33 kDa, Protein from Trypanosoma brucei brucei)
- Ml97 (12 kDa, Protein from Trypanosoma brucei brucei)
- Spermidine (145 Da, Ligand)
- Ms38 (28 kDa, Protein from Trypanosoma brucei brucei)
- Us11m (37 kDa, Protein from Trypanosoma brucei brucei)
- Ul30m (25 kDa, Protein from Trypanosoma brucei brucei)
- Ms71 (20 kDa, Protein from Trypanosoma brucei brucei)
- Us15m (50 kDa, Protein from Trypanosoma brucei brucei)
- Ml63 (18 kDa, Protein from Trypanosoma brucei brucei)
- Unk (3 kDa, Protein from Trypanosoma brucei brucei)
- Bl36m (21 kDa, Protein from Trypanosoma brucei brucei)
- Bl9m (31 kDa, Protein from Trypanosoma brucei brucei)
- Ml79 (33 kDa, Protein from Trypanosoma brucei brucei)
- Ml42 (21 kDa, Protein from Trypanosoma brucei brucei)
- Mt-if-3 (41 kDa, Protein from Trypanosoma brucei brucei)
- Ml74 (39 kDa, Protein from Trypanosoma brucei brucei)
- Us14m (19 kDa, Protein from Trypanosoma brucei brucei)
- Ml83 (25 kDa, Protein from Trypanosoma brucei brucei)
- Ms63 (31 kDa, Protein from Trypanosoma brucei brucei)
- Ms58 (35 kDa, Protein from Trypanosoma brucei brucei)
- Bl12m (1 kDa, Protein from Trypanosoma brucei brucei)
- Ml96 (16 kDa, Protein from Trypanosoma brucei brucei)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- 50s ribosomal protein l17, putative (35 kDa, Protein from Trypanosoma brucei brucei)
- Ms64 (30 kDa, Protein from Trypanosoma brucei brucei)
- Us10m (94 kDa, Protein from Trypanosoma brucei brucei)
- Ms66 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ms47 (137 kDa, Protein from Trypanosoma brucei brucei)
- Bs18m (36 kDa, Protein from Trypanosoma brucei brucei)
- Us12 (10 kDa, Protein from Trypanosoma brucei brucei)
- Bl33m (13 kDa, Protein from Trypanosoma brucei brucei)
- Ml92 (20 kDa, Protein from Trypanosoma brucei brucei)
- Ul10m (20 kDa, Protein from Trypanosoma brucei brucei)
- Ms61 (33 kDa, Protein from Trypanosoma brucei brucei)
- Ms56 (47 kDa, Protein from Trypanosoma brucei brucei)
- Ml99 (12 kDa, Protein from Trypanosoma brucei brucei)
- Bl12m (2 kDa, Protein from Trypanosoma brucei brucei)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ms91 (20 kDa, Protein from Trypanosoma brucei brucei)
- Ms23 (36 kDa, Protein from Trypanosoma brucei brucei)
- Ul3m (55 kDa, Protein from Trypanosoma brucei brucei)
- Ml43 (31 kDa, Protein from Trypanosoma brucei brucei)
- Ml49 (24 kDa, Protein from Trypanosoma brucei brucei)
- Ml98 (12 kDa, Protein from Trypanosoma brucei brucei)
- Ml90 (22 kDa, Protein from Trypanosoma brucei brucei)
- Unk (1 kDa, Protein from Trypanosoma brucei brucei)
- Ms33 (21 kDa, Protein from Trypanosoma brucei brucei)
- Unk (3 kDa, Protein from Trypanosoma brucei brucei)
- Ms67 (30 kDa, Protein from Trypanosoma brucei brucei)
- Us19m (28 kDa, Protein from Trypanosoma brucei brucei)
- Ms53 (75 kDa, Protein from Trypanosoma brucei brucei)
- Ms62 (32 kDa, Protein from Trypanosoma brucei brucei)
- Ms22 (73 kDa, Protein from Trypanosoma brucei brucei)
- Ul24m (43 kDa, Protein from Trypanosoma brucei brucei)
- Unk (869 Da, Protein from Trypanosoma brucei brucei)
- Zinc ion (65 Da, Ligand)
- Ml88 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ml89 (22 kDa, Protein from Trypanosoma brucei brucei)
- Bl35m (21 kDa, Protein from Trypanosoma brucei brucei)
- Ml76 (39 kDa, Protein from Trypanosoma brucei brucei)
- Unk (443 Da, Protein from Trypanosoma brucei brucei)
- Water (18 Da, Ligand)
- Us17m (35 kDa, Protein from Trypanosoma brucei brucei)
- Ms70 (21 kDa, Protein from Trypanosoma brucei brucei)
- Ms49 (137 kDa, Protein from Trypanosoma brucei brucei)
- Ml72 (49 kDa, Protein from Trypanosoma brucei brucei)
- Ul4m (53 kDa, Protein from Trypanosoma brucei brucei)
- Ms51 (95 kDa, Protein from Trypanosoma brucei brucei)
- Ml53 (35 kDa, Protein from Trypanosoma brucei brucei)
- Ml77 (42 kDa, Protein from Trypanosoma brucei brucei)
- Ms59 (35 kDa, Protein from Trypanosoma brucei brucei)
- 12s rrna (377 kDa, RNA from Trypanosoma brucei brucei)
- Ms65 (30 kDa, Protein from Trypanosoma brucei brucei)
- Ms50 (131 kDa, Protein from Trypanosoma brucei brucei)
- Ml73 (41 kDa, Protein from Trypanosoma brucei brucei)
- Ml68 (60 kDa, Protein from Trypanosoma brucei brucei)
- Ml95 (17 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- Bl31m (21 kDa, Protein from Trypanosoma brucei brucei)
- Ms34 (28 kDa, Protein from Trypanosoma brucei brucei)
- Ms60 (34 kDa, Protein from Trypanosoma brucei brucei)
- Ms52 (84 kDa, Protein from Trypanosoma brucei brucei)
- Ml85 (18 kDa, Protein from Trypanosoma brucei brucei)
- Ms55 (66 kDa, Protein from Trypanosoma brucei brucei)
- 9s rrna (198 kDa, RNA from Trypanosoma brucei brucei)
- Bl19m (16 kDa, Protein from Trypanosoma brucei brucei)
- Ml70 (62 kDa, Protein from Trypanosoma brucei brucei)
- Ul15m (43 kDa, Protein from Trypanosoma brucei brucei)
- Ul22m (32 kDa, Protein from Trypanosoma brucei brucei)
- Ul29m (54 kDa, Protein from Trypanosoma brucei brucei)
- 50s ribosomal protein l13, putative (24 kDa, Protein from Trypanosoma brucei brucei)
- Unk (698 Da, Protein from Trypanosoma brucei brucei)
- Us9m (50 kDa, Protein from Trypanosoma brucei brucei)
- 50s ribosomal protein l16, putative (19 kDa, Protein from Trypanosoma brucei brucei)
- Ml68 (28 kDa, Protein from Trypanosoma brucei brucei)
- Ms48 (201 kDa, Protein from Trypanosoma brucei brucei)
- Ml80 (34 kDa, Protein from Trypanosoma brucei brucei)
- Ml86 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ml94 (17 kDa, Protein from Trypanosoma brucei brucei)
- Unk (528 Da, Protein from Trypanosoma brucei brucei)
- Ml52 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ml69 (59 kDa, Protein from Trypanosoma brucei brucei)
- Ms68 (26 kDa, Protein from Trypanosoma brucei brucei)
- Bs16m (22 kDa, Protein from Trypanosoma brucei brucei)
- Ms42 (29 kDa, Protein from Trypanosoma brucei brucei)
Release date: Sept. 26, 2018
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 6hiw
Q-score: 0.488
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 6hiw
Q-score: 0.488
Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boehringer D, Schneider A, Ban N
Science (2018) 362 [ DOI: doi:10.1126/science.aau7735 Pubmed: 30213880 ]
Sample:
- Ms71 (20 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (2 kDa, Protein from Trypanosoma brucei brucei)
- Ms63 (31 kDa, Protein from Trypanosoma brucei brucei)
- Ms43 (48 kDa, Protein from Trypanosoma brucei brucei)
- Ms35 (98 kDa, Protein from Trypanosoma brucei brucei)
- Ms72 (19 kDa, Protein from Trypanosoma brucei brucei)
- Ms53 (75 kDa, Protein from Trypanosoma brucei brucei)
- Ms70 (21 kDa, Protein from Trypanosoma brucei brucei)
- Ms65 (30 kDa, Protein from Trypanosoma brucei brucei)
- Ms60 (34 kDa, Protein from Trypanosoma brucei brucei)
- Ms62 (32 kDa, Protein from Trypanosoma brucei brucei)
- Ms47 (137 kDa, Protein from Trypanosoma brucei brucei)
- Us8m (32 kDa, Protein from Trypanosoma brucei brucei)
- Ms37 (24 kDa, Protein from Trypanosoma brucei brucei)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Ms55 (66 kDa, Protein from Trypanosoma brucei brucei)
- Ms48 (201 kDa, Protein from Trypanosoma brucei brucei)
- Us5m (50 kDa, Protein from Trypanosoma brucei brucei)
- Ms69 (21 kDa, Protein from Trypanosoma brucei brucei)
- Ms41 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ms52 (85 kDa, Protein from Trypanosoma brucei brucei)
- Ms42 (29 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- Ms74 (8 kDa, Protein from Trypanosoma brucei brucei)
- Ms34 (28 kDa, Protein from Trypanosoma brucei brucei)
- Spermidine (145 Da, Ligand)
- Unknown protein (4 kDa, Protein from Trypanosoma brucei brucei)
- Us12m (10 kDa, Protein from Trypanosoma brucei brucei)
- Us3m (9 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (443 Da, Protein from Trypanosoma brucei brucei)
- Ms66 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ms23 (36 kDa, Protein from Trypanosoma brucei brucei)
- Us11m (37 kDa, Protein from Trypanosoma brucei brucei)
- Ms38 (28 kDa, Protein from Trypanosoma brucei brucei)
- Ms50 (131 kDa, Protein from Trypanosoma brucei brucei)
- Ms59 (35 kDa, Protein from Trypanosoma brucei brucei)
- Ms51 (95 kDa, Protein from Trypanosoma brucei brucei)
- Us15m (50 kDa, Protein from Trypanosoma brucei brucei)
- Ms33 (21 kDa, Protein from Trypanosoma brucei brucei)
- Bs21m (23 kDa, Protein from Trypanosoma brucei brucei)
- Ms64 (30 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (698 Da, Protein from Trypanosoma brucei brucei)
- Spermine (202 Da, Ligand)
- Us19m (28 kDa, Protein from Trypanosoma brucei brucei)
- Mt-if-3 (41 kDa, Protein from Trypanosoma brucei brucei)
- Ms22 (73 kDa, Protein from Trypanosoma brucei brucei)
- Ms54 (72 kDa, Protein from Trypanosoma brucei brucei)
- Zinc ion (65 Da, Ligand)
- Us14m (19 kDa, Protein from Trypanosoma brucei brucei)
- Ms61 (33 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (3 kDa, Protein from Trypanosoma brucei brucei)
- Small subunit of the t. brucei mitoribosome in complex with mt-if-3 (2 MDa, Complex from Trypanosoma brucei brucei)
- Us9m (50 kDa, Protein from Trypanosoma brucei brucei)
- Ms29 (57 kDa, Protein from Trypanosoma brucei brucei)
- Ms68 (26 kDa, Protein from Trypanosoma brucei brucei)
- Uridine 5'-triphosphate (484 Da, Ligand)
- Ms56 (47 kDa, Protein from Trypanosoma brucei brucei)
- 9s rrna (198 kDa, RNA from Trypanosoma brucei brucei)
- Ms57 (45 kDa, Protein from Trypanosoma brucei brucei)
- Ms67 (30 kDa, Protein from Trypanosoma brucei brucei)
- Bs16m (22 kDa, Protein from Trypanosoma brucei brucei)
- Bs6m (18 kDa, Protein from Trypanosoma brucei brucei)
- Us17m (35 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (613 Da, Protein from Trypanosoma brucei brucei)
- Ms58 (35 kDa, Protein from Trypanosoma brucei brucei)
- Water (18 Da, Ligand)
- Ms49 (137 kDa, Protein from Trypanosoma brucei brucei)
- Us10m (94 kDa, Protein from Trypanosoma brucei brucei)
- Ms26 (51 kDa, Protein from Trypanosoma brucei brucei)
- Ms73 (11 kDa, Protein from Trypanosoma brucei brucei)
- Bs18m (36 kDa, Protein from Trypanosoma brucei brucei)
Release date: Sept. 26, 2018
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 6hiy
Q-score: 0.516
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 6hiy
Q-score: 0.516
Ramrath DJF, Niemann M, Leibundgut M, Bieri P, Prange C, Horn EK, Leitner A, Boehringer D, Schneider A, Ban N
Science (2018) 362 [ DOI: doi:10.1126/science.aau7735 Pubmed: 30213880 ]
Sample:
- Ms63 (31 kDa, Protein from Trypanosoma brucei brucei)
- Ms43 (48 kDa, Protein from Trypanosoma brucei brucei)
- Ms65 (30 kDa, Protein from Trypanosoma brucei brucei)
- Ms60 (34 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (698 Da, Protein from Trypanosoma brucei brucei)
- Ms62 (32 kDa, Protein from Trypanosoma brucei brucei)
- Us8m (32 kDa, Protein from Trypanosoma brucei brucei)
- Ms37 (24 kDa, Protein from Trypanosoma brucei brucei)
- 9s rrna (198 kDa, RNA from Trypanosoma brucei brucei)
- Ms48 (201 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (4 kDa, Protein from Trypanosoma brucei brucei)
- Ms23 (36 kDa, Protein from Trypanosoma brucei brucei)
- Ms41 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ms42 (29 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- Ms74 (8 kDa, Protein from Trypanosoma brucei brucei)
- Ms34 (28 kDa, Protein from Trypanosoma brucei brucei)
- Spermidine (145 Da, Ligand)
- Us12m (10 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (3 kDa, Protein from Trypanosoma brucei brucei)
- Ms66 (29 kDa, Protein from Trypanosoma brucei brucei)
- Ms38 (28 kDa, Protein from Trypanosoma brucei brucei)
- Us11m (37 kDa, Protein from Trypanosoma brucei brucei)
- Us21m (23 kDa, Protein from Trypanosoma brucei brucei)
- Body of the t. brucei mitoribosome small subunit in complex with mt-if-3 (1 MDa, Complex from Trypanosoma brucei brucei)
- Ms59 (35 kDa, Protein from Trypanosoma brucei brucei)
- Ms51 (95 kDa, Protein from Trypanosoma brucei brucei)
- Us15m (50 kDa, Protein from Trypanosoma brucei brucei)
- Ms64 (30 kDa, Protein from Trypanosoma brucei brucei)
- Ms55m (50 kDa, Protein from Trypanosoma brucei brucei)
- Spermine (202 Da, Ligand)
- Mt-if-3 (41 kDa, Protein from Trypanosoma brucei brucei)
- Ms22 (73 kDa, Protein from Trypanosoma brucei brucei)
- Zinc ion (65 Da, Ligand)
- Ms61 (33 kDa, Protein from Trypanosoma brucei brucei)
- Us9m (50 kDa, Protein from Trypanosoma brucei brucei)
- Ms68 (26 kDa, Protein from Trypanosoma brucei brucei)
- Ms56 (47 kDa, Protein from Trypanosoma brucei brucei)
- Bs16m (22 kDa, Protein from Trypanosoma brucei brucei)
- Bs6m (18 kDa, Protein from Trypanosoma brucei brucei)
- Us17m (35 kDa, Protein from Trypanosoma brucei brucei)
- Unknown protein (2 kDa, Protein from Trypanosoma brucei brucei)
- Ms73 (11 kDa, Protein from Trypanosoma brucei brucei)
- Ms26 (51 kDa, Protein from Trypanosoma brucei brucei)
- Ms47 (137 kDa, Protein from Trypanosoma brucei brucei)
- Bs18m (36 kDa, Protein from Trypanosoma brucei brucei)
Release date: Aug. 22, 2018
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6gaw
Q-score: 0.449
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6gaw
Q-score: 0.449
Kummer E, Leibundgut M, Rackham O, Lee RG, Boehringer D, Filipovska A, Ban N
Nature (2018) 560 pp. 263-267 [ Pubmed: 30089917 DOI: doi:10.1038/s41586-018-0373-y ]
Sample:
- Translation initiation factor if-2, mitochondrial (72 kDa, Protein from Homo sapiens)
- Mitochondrial ribosomal protein l20 (17 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l46 (32 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s7 (28 kDa, Protein from Pig)
- Ict1 (38 kDa, Protein from Pig)
- Ms27 (51 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Pig)
- Ribosomal protein (10 kDa, Protein from Pig)
- Ml42 (16 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s25 (19 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l18 (20 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s2 (31 kDa, Protein from Pig)
- Spermine (202 Da, Ligand)
- Bl33m (7 kDa, Protein from Pig)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s5 (48 kDa, Protein from Pig)
- 28s ribosomal protein s28, mitochondrial (21 kDa, Protein from Pig)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Pig)
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial (78 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l38 (44 kDa, Protein from Pig)
- Bl32m (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l28 (30 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l10 (29 kDa, Protein from Pig)
- Ul22m (24 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l51 (15 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l48 (23 kDa, Protein from Pig)
- Guanosine-5'-monophosphate (363 Da, Ligand)
- Aurora kinase a interacting protein 1 (22 kDa, Protein from Pig)
- Ml53 (12 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s34, mitochondrial (25 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l35 (21 kDa, Protein from Pig)
- Mt-co3 mrna, mitochondrial (63 kDa, RNA from Homo sapiens)
- Ml45 (35 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l39 (38 kDa, Protein from Pig)
- 28s ribosomal protein s11, mitochondrial (20 kDa, Protein from Pig)
- Ml65 (49 kDa, Protein from Sus scrofa)
- Death associated protein 3 (45 kDa, Protein from Pig)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Pig)
- Unassigned secondary structure elements (1 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l17, mitochondrial (19 kDa, Protein from Pig)
- Ml64 (25 kDa, Protein from Pig)
- Trna-phe, mitochondrial (23 kDa, RNA from pig)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Pig)
- Uncharacterized protein (27 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s22 (43 kDa, Protein from Pig)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Mitochondrial ribosomal protein l37 (47 kDa, Protein from Pig)
- Bs21m (10 kDa, Protein from Pig)
- N-formylmethionine (177 Da, Ligand)
- Mitochondrial ribosomal protein s26 (23 kDa, Protein from Pig)
- Ul30m (18 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l21 (23 kDa, Protein from Pig)
- 28s ribosomal protein s23, mitochondrial (21 kDa, Protein from Pig)
- Sodium ion (22 Da, Ligand)
- Mammalian mitochondrial translation initiation complex (2 MDa, Complex from sus sucorfa)
- Ml43 (17 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Pig)
- Zinc ion (65 Da, Ligand)
- Mitochondrial ribosomal protein l11 (20 kDa, Protein from pig)
- Mitochondrial ribosomal protein l41 (15 kDa, Protein from Pig)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Pig)
- Water (18 Da, Ligand)
- Ms33 (12 kDa, Protein from Pig)
- Ul23m (17 kDa, Protein from Pig)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Pig)
- Ml50 (18 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s18c (16 kDa, Protein from Pig)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Pig)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s10 (23 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l9 (30 kDa, Protein from Pig)
- Us17m (14 kDa, Protein from Pig)
- Ml54 (15 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Pig)
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Pig)
- 39s ribosomal protein l40, mitochondrial isoform 1 (24 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Pig)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Ms31 (44 kDa, Protein from Pig)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Pig)
- Bs16m (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l27 (15 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l34 (10 kDa, Protein from Pig)
- 12s ribosomal rna, mitochondrial (308 kDa, RNA from Sus scrofa)
- 39s ribosomal protein l49, mitochondrial (18 kDa, Protein from Pig)
- Ul14m (15 kDa, Protein from Pig)
- Unassigned secondary structure elements (5 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s35, mitochondrial (37 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s6 (14 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s14 (15 kDa, Protein from Pig)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l47 (30 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s12 (15 kDa, Protein from Pig)
- 16s ribosomal rna, mitochondrial (504 kDa, RNA from pig)
- Mitochondrial ribosomal protein s24 (18 kDa, Protein from Pig)
- P-site fmet-trnamet, mitochondrial (22 kDa, RNA from Homo sapiens)
Release date: Aug. 8, 2018
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6gaz
Q-score: 0.462
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6gaz
Q-score: 0.462
Kummer E, Leibundgut M, Rackham O, Lee RG, Boehringer D, Filipovska A, Ban N
Nature (2018) 560 pp. 263-267 [ Pubmed: 30089917 DOI: doi:10.1038/s41586-018-0373-y ]
Sample:
- Translation initiation factor if-2, mitochondrial (Complex from Homo sapiens)
- Nucleic acids (Complex from Homo sapiens)
- Unassigned secondary structure elements (1 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s21 (10 kDa, Protein from Pig)
- Mitoribosomal protein ms28, mrps28 (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s5 (48 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s18c (16 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s33 (12 kDa, Protein from Pig)
- Ms31, mrps31 (44 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s37 (13 kDa, Protein from Pig)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Mitochondrial ribosomal protein s9 (45 kDa, Protein from Pig)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
- N-formylmethionine (177 Da, Ligand)
- Mitochondrial ribosomal protein s25 (19 kDa, Protein from Pig)
- Sodium ion (22 Da, Ligand)
- Aurora kinase a interacting protein 1 (22 kDa, Protein from Pig)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Pig)
- 12s ribosomal rna, mitochondrial (308 kDa, RNA from Sus scrofa)
- Spermine (202 Da, Ligand)
- Mitochondrial ribosomal protein s24 (18 kDa, Protein from Pig)
- Porcine ribosome (Complex from Sus scrofa)
- P-site fmet-trnamet, mitochondrial (22 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Pig)
- Translation initiation factor if-2, mitochondrial (72 kDa, Protein from Homo sapiens)
- Mammalian mitochondrial translation initiation complex (2 MDa, Complex)
- Mitochondrial ribosomal protein s26 (23 kDa, Protein from Pig)
- Zinc ion (65 Da, Ligand)
- Mt-co3 mrna, mitochondrial (63 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein s15 (27 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s23 (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s10 (23 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s35 (37 kDa, Protein from Pig)
- Water (18 Da, Ligand)
- Mitochondrial ribosomal protein s34 (25 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s17 (14 kDa, Protein from Pig)
- Death associated protein 3 (45 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s27 (45 kDa, Protein from Pig)
- Magnesium ion (24 Da, Ligand)
- Mitochondrial ribosomal protein s39 (76 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s6 (14 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s11 (20 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s2 (31 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s22 (43 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s14 (15 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s7 (28 kDa, Protein from Pig)
- Bs16m, mrps16 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s12 (15 kDa, Protein from Pig)
Release date: Aug. 8, 2018
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6gb2
Q-score: 0.481
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6gb2
Q-score: 0.481
Kummer E, Leibundgut M, Rackham O, Lee RG, Boehringer D, Filipovska A, Ban N
Nature (2018) 560 pp. 263-267 [ Pubmed: 30089917 DOI: doi:10.1038/s41586-018-0373-y ]
Sample:
- Mitochondrial ribosomal protein l38 (44 kDa, Protein from Sus scrofa)
- Ict1 (38 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l50 (18 kDa, Protein from Sus scrofa)
- Mammalian mitochondrial ribosome (Complex from Sus scrofa)
- Mitochondrial ribosomal protein l34 (10 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l20 (17 kDa, Protein from Sus scrofa)
- 'mitochondrial ribosomal protein l59 (25 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l33 (7 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l15 (33 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l58 (23 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l39 (38 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l42 (16 kDa, Protein from Sus scrofa)
- P-site fmet-trnamet, mitochondrial (22 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein l47 (30 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l23 (17 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l44 (37 kDa, Protein from Sus scrofa)
- 'mitochondrial ribosomal protein l55 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l28 (30 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l16 (28 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l45 (35 kDa, Protein from Sus scrofa)
- 16s ribosomal rna, mitochondrial (504 kDa, RNA from Sus scrofa)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l11 (20 kDa, Protein from Sus scrofa)
- Trna (Complex from Homo sapiens)
- Mitochondrial ribosomal protein l32 (21 kDa, Protein from Sus scrofa)
- Mammalian mitochondrial translation initiation complex (2 MDa, Complex)
- Mitochondrial ribosomal protein l40 (24 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Guanosine-5'-monophosphate (363 Da, Ligand)
- 5'-guanosine-diphosphate-monothiophosphate (539 Da, Ligand)
- N-formylmethionine (177 Da, Ligand)
- Mitochondrial ribosomal protein l52 (13 kDa, Protein from Sus scrofa)
- Translation initiation factor if-2, mitochondrial (72 kDa, Protein from Homo sapiens)
- Mitochondrial ribosomal protein l35 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l22 (24 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l48 (23 kDa, Protein from Sus scrofa)
- Cp trnaphe, mitochondrial (23 kDa, RNA from Sus scrofa)
- Unassigned secondary structure elements (5 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l24 (24 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l21 (23 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l13 (20 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l41 (15 kDa, Protein from Sus scrofa)
- Ml65, mrps30 (49 kDa, Protein from Sus scrofa)
- Sodium ion (22 Da, Ligand)
- Mitochondrial ribosomal protein l18 (20 kDa, Protein from Sus scrofa)
- Spermine (202 Da, Ligand)
- Mitochondrial ribosomal protein l14 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l10 (29 kDa, Protein from Sus scrofa)
- Zinc ion (65 Da, Ligand)
- Mitochondrial ribosomal protein l43 (17 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l9 (30 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l51 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Sus scrofa)
- Ml53, mrpl53 (12 kDa, Protein from Sus scrofa)
- Uncharacterized protein (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l46 (32 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l27 (15 kDa, Protein from Sus scrofa)
- Mrpl34 (18 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l37 (47 kDa, Protein from Sus scrofa)
- Translation initiation factor if-2, mitochondrial (Complex from Homo sapiens)
- Water (18 Da, Ligand)
- 'mitochondrial ribosomal protein l30 (18 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l17 (19 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l2 (33 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Sus scrofa)
- Ribosomal protein (10 kDa, Protein from Sus scrofa)