cryo EM map of the S protein of SARS-CoV-2 in complex bound with P2B-1A10
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7czq
Q-score: 0.385
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of sars-cov-2 in complex bound with p2b-1a10 (Complex from Homo sapiens)
- Immunoglobulin kappa variable 1-33,uncharacterized protein (23 kDa, Protein from Homo sapiens)
- Ig c642_heavy_ighv3-53_ighd1-26_ighj6,chain h of p2b-1a10,immunoglobulin gamma-1 heavy chain (49 kDa, Protein from Homo sapiens)
S protein of SARS-CoV-2 in complex bound with P5A-1B8_2B
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7czr
Q-score: 0.303
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Igl c4203_light_igkv1-9_igkj4,igl c4203_light_igkv1-9_igkj4,uncharacterized protein (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Ig c542_heavy_ighv3-53_ighd3-10_ighj6,igh@ protein (48 kDa, Protein from Homo sapiens)
- S protein of sars-cov-2 in complex bound with p5a-1b8_2b (Complex from Homo sapiens)
S protein of SARS-CoV-2 in complex bound with P5A-1B8_3B
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7czs
Q-score: 0.261
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S protein of sars-cov-2 in complex bound with p5a-1b8_3b (Complex from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Igl c4203_light_igkv1-9_igkj4,uncharacterized protein (23 kDa, Protein from Homo sapiens)
- Ig c542_heavy_ighv3-53_ighd3-10_ighj6,igh@ protein (48 kDa, Protein from Homo sapiens)
S protein of SARS-CoV-2 in complex bound with P5A-1B6_2B
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7czu
Q-score: 0.324
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- S protein of sars-cov-2 in complex bound with p5a-1b6_2b (Complex from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Immunoglobulin heavy variable 3-30-3,immunoglobulin heavy variable 3-30-3,chain h of p5a-1b6_2b,immunoglobulin gamma-1 heavy chain,immunoglobulin gamma-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Immunoglobulin kappa variable 1-33,immunoglobulin kappa variable 1-33,uncharacterized protein (23 kDa, Protein from Homo sapiens)
S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7czv
Q-score: 0.26
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Immunoglobulin heavy variable 3-30-3,chain h of p5a-1b6_3b,immunoglobulin gamma-1 heavy chain (49 kDa, Protein from Homo sapiens)
- Immunoglobulin kappa variable 1-33,uncharacterized protein (23 kDa, Protein from Homo sapiens)
- S protein of sars-cov-2 in complex bound with p5a-1b6_3b (Complex from Homo sapiens)
S protein of SARS-CoV-2 in complex bound with P5A-1B9
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7czx
Q-score: 0.333
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- S protein of sars-cov-2 in complex bound with p5a-1b9 (Complex from Homo sapiens)
- Immunoglobulin heavy variable 4-59,chain h of p5a-1b9,igh@ protein (50 kDa, Protein from Homo sapiens)
- Ig c168_light_igkv4-1_igkj4,uncharacterized protein (24 kDa, Protein from Homo sapiens)
S protein of SARS-CoV-2 in complex bound with FabP5A-1B8
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7d00
Q-score: 0.36
Yan R, Wang R, Ju B, Yu J, Zhang Y, Liu N, Wang J, Zhang Q, Chen P, Zhou B, Li Y, Shen Y, Zhang S, Tian L, Guo Y, Xia L, Zhong X, Cheng L, Ge X, Zhao J, Wang HW, Wang X, Zhang Z, Zhang L, Zhou Q
Cell Res (2021) 31 pp. 517-525 [ Pubmed: 33731853 DOI: doi:10.1038/s41422-021-00487-9 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ig c642_heavy_ighv3-53_ighd1-26_ighj6,chain h of fabp5a-1b8,igh@ protein (48 kDa, Protein from Homo sapiens)
- S protein of sars-cov-2 in complex bound with fabp5a-1b8 (Complex from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Igl c4203_light_igkv1-9_igkj4,uncharacterized protein (23 kDa, Protein from Homo sapiens)