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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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sample_name:"Uncharacterized protein" AND citation_journal_name:"NAT COMMUN" AND natural_source_ncbi_code:"367110"

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EMD-10973

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The structure of the large subunit of the mitoribosome from Neurospora crassa

Release date: Nov. 11, 2020
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 6yws
Q-score: 0.601

Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A

Nat Commun (2020) 11 pp. 5187-5187 [ DOI: doi:10.1038/s41467-020-18830-w Pubmed: 33056988 ]

Sample:

Ribosomal protein (13 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l6 (28 kDa, Protein from Neurospora crassa OR74A)
Potassium ion (39 Da, Ligand)
60s ribosomal protein l2 (42 kDa, Protein from Neurospora crassa OR74A)
Ribosomal_l9 domain-containing protein (33 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (49 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l14 (14 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (37 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l20 (25 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal subunit l30 (41 kDa, Protein from Neurospora crassa OR74A)
Magnesium ion (24 Da, Ligand)
Uncharacterized protein (32 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (49 kDa, Protein from Neurospora crassa OR74A)
54s ribosomal protein l4, mitochondrial (29 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (41 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l4, variant (36 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l5 (39 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein subunit l32 (14 kDa, Protein from Neurospora crassa OR74A)
Aconitate hydratase (23 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l30 (18 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein l43 (15 kDa, Protein from Neurospora crassa OR74A)
Ribosomal protein l13 (20 kDa, Protein from Neurospora crassa OR74A)
Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
Mitochondrial ribosomal protein l44 (11 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l24 (31 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l16 (27 kDa, Protein from Neurospora crassa OR74A)
Mitoc_ml59 domain-containing protein (18 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (23 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein subunit l23 (26 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l3 (48 kDa, Protein from Neurospora crassa OR74A)
Kow domain-containing protein (45 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (7 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (18 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (23 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l1 (33 kDa, Protein from Neurospora crassa OR74A)
L51_s25_ci-b8 domain-containing protein (22 kDa, Protein from Neurospora crassa OR74A)
Spermine (202 Da, Ligand)
Zinc ion (65 Da, Ligand)
Mitochondrial ribosomal protein (28 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (11 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial large ribosomal subunit (41 kDa, Protein from Neurospora crassa OR74A)
Ribosomal protein l15 (33 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l19 (16 kDa, Protein from Neurospora crassa OR74A)
Rnase iii domain-containing protein (29 kDa, Protein from Neurospora crassa OR74A)
Mitoribosome of neurospora crassa (Complex from Neurospora crassa OR74A)
50s ribosomal protein l17 (22 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial large ribosomal subunit yml35 (50 kDa, Protein from Neurospora crassa OR74A)
Rna (2820-mer) (1 MDa, RNA from Neurospora crassa OR74A)
54s ribosomal protein l31, mitochondrial (13 kDa, Protein from Neurospora crassa OR74A)
Related to ribosomal protein l34, mitochondrial (14 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l3 (41 kDa, Protein from Neurospora crassa OR74A)

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EMD-10977

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The structure of the Atp25 bound assembly intermediate of the mitoribosome from Neurospora crassa

Release date: Nov. 11, 2020
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 6ywv
Q-score: 0.544

Itoh Y, Naschberger A, Mortezaei N, Herrmann JM, Amunts A

Nat Commun (2020) 11 pp. 5187-5187 [ Pubmed: 33056988 DOI: doi:10.1038/s41467-020-18830-w ]

Sample:

Mitochondrial ribosomal protein l43 (15 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein subunit l32 (14 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (49 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein subunit l23 (26 kDa, Protein from Neurospora crassa OR74A)
Assembly intermediate of the mitoribosome of neurospora crassa (Complex from Neurospora crassa OR74A)
60s ribosomal protein l6 (28 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (14 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (11 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l17 (22 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (23 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l20 (25 kDa, Protein from Neurospora crassa OR74A)
Rnase iii domain-containing protein (29 kDa, Protein from Neurospora crassa OR74A)
54s ribosomal protein l4, mitochondrial (29 kDa, Protein from Neurospora crassa OR74A)
23 s rrna (1 MDa, RNA from Neurospora crassa OR74A)
Ribosomal protein (13 kDa, Protein from Neurospora crassa OR74A)
Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
50s ribosomal subunit protein l15 (33 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l30 (18 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (37 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial large ribosomal subunit yml35 (50 kDa, Protein from Neurospora crassa OR74A)
Spermine (202 Da, Ligand)
Uncharacterized protein (18 kDa, Protein from Neurospora crassa OR74A)
Kow domain-containing protein (45 kDa, Protein from Neurospora crassa OR74A)
Potassium ion (39 Da, Ligand)
Uncharacterized protein (7 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l24 (31 kDa, Protein from Neurospora crassa OR74A)
Zinc ion (65 Da, Ligand)
60s ribosomal protein l16 (27 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l3 (41 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein (28 kDa, Protein from Neurospora crassa OR74A)
Atpase synthesis protein 25, mitochondrial (77 kDa, Protein from Neurospora crassa OR74A)
Aconitate hydratase (23 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (41 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial large ribosomal subunit (41 kDa, Protein from Neurospora crassa OR74A)
54s ribosomal protein l31, mitochondrial (13 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (23 kDa, Protein from Neurospora crassa OR74A)
Magnesium ion (24 Da, Ligand)
50s ribosomal protein l5 (39 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l2 (42 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal subunit l30 (41 kDa, Protein from Neurospora crassa OR74A)
50s ribosomal protein l14 (14 kDa, Protein from Neurospora crassa OR74A)
Ribosomal protein l13 (20 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l4, variant (36 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l19 (16 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial ribosomal protein l44 (11 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (32 kDa, Protein from Neurospora crassa OR74A)
Uncharacterized protein (49 kDa, Protein from Neurospora crassa OR74A)
60s ribosomal protein l3 (48 kDa, Protein from Neurospora crassa OR74A)
Mitochondrial 60s ribosomal protein l25 (18 kDa, Protein from Neurospora crassa OR74A)

[Show more]

Sort by: Download

Showing 1 - 2 of 2. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [2]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: