Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffe
Q-score: 0.425
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7fff
Q-score: 0.48
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Low-density lipoprotein receptor class a domain-containing protein 3 (7 kDa, Protein from Homo sapiens)
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Ldlrad3 (Complex)
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 2-fold axes
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7ffl
Q-score: 0.466
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Low-density lipoprotein receptor class a domain-containing protein 3 (7 kDa, Protein from Homo sapiens)
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Homo sapiens)
- Calcium ion (40 Da, Ligand)
- Ldlrad3-d1 (Complex)
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 5-fold axes
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7ffn
Q-score: 0.506
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Complex from Homo sapiens)
- Low-density lipoprotein receptor class a domain-containing protein 3 (8 kDa, Protein from Homo sapiens)
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Calcium ion (40 Da, Ligand)
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Ldlrad3 (Complex)
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP at the 5-fold axes
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffo
Q-score: 0.45
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of VEEV VLP at the 2-fold axes
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ffq
Q-score: 0.382
Ma B, Huang C, Ma J, Xiang Y, Zhang X
Nature (2021) 598 pp. 677-681 [ DOI: doi:10.1038/s41586-021-03909-1 Pubmed: 34646021 ]
- Spike glycoprotein e2 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Spike glycoprotein e1 (47 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Venezuelan equine encephalitis virus (strain tc-83) (Virus from Venezuelan equine encephalitis virus (strain TC-83))
- Assembly protein e3 (6 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
- Capsid protein (30 kDa, Protein from Venezuelan equine encephalitis virus (strain TC-83))
Cryo-EM structure of an alphavirus, Sindbis virus
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6imm
Q-score: 0.473
Chen L, Wang M, Zhu D, Sun Z, Ma J, Wang J, Kong L, Wang S, Liu Z, Wei L, He Y, Wang J, Zhang X
Nat Commun (2018) 9 pp. 5326-5326 [ DOI: doi:10.1038/s41467-018-07704-x Pubmed: 30552337 ]
- Assembly protein e3 (7 kDa, Protein from SINV)
- Spike glycoprotein e2 (43 kDa, Protein from SINV)
- Spike glycoprotein e1 (47 kDa, Protein from SINV)
- Sindbis virus (Virus from Sindbis virus)
- Octadecane (254 Da, Ligand)