Detergent-solubilized E. coli RseP in complex with Fab
Imaizumi Y, Takanuki K, Miyake T, Takemoto M, Hirata K, Hirose M, Oi R, Kobayashi T, Miyoshi K, Aruga R, Yokoyama T, Katagiri S, Matsuura H, Iwasaki K, Kato T, Kaneko MK, Kato Y, Tajiri M, Akashi S, Nureki O, Hizukuri Y, Akiyama Y, Nogi T
Sci Adv (2022) 8 pp. eabp9011-eabp9011 [ DOI: doi:10.1126/sciadv.abp9011 Pubmed: 36001659 ]
- Binary complex of e. coli rsep with fab (Complex)
- Fab (Complex from Mus musculus)
- Rsep (Protein from Escherichia coli)
- Heavy chain of fab (Protein from Mus musculus)
- Light chain of fab (Protein from Mus musculus)
- Rsep (Complex from Escherichia coli)
Deterget-solubilized E. coli RseP(L358C) mutant in complex with Fab
Imaizumi Y, Takanuki K, Miyake T, Takemoto M, Hirata K, Hirose M, Oi R, Kobayashi T, Miyoshi K, Aruga R, Yokoyama T, Katagiri S, Matsuura H, Iwasaki K, Kato T, Kaneko MK, Kato Y, Tajiri M, Akashi S, Nureki O, Hizukuri Y, Akiyama Y, Nogi T
Sci Adv (2022) 8 pp. eabp9011-eabp9011 [ DOI: doi:10.1126/sciadv.abp9011 Pubmed: 36001659 ]
- Heavy chain of fab (Protein from Mus musculus)
- Light chain of fab (Protein from Mus musculus)
- Binary complex of e. coli rsep(l358c) mutant with fab (Complex)
- E. coli rsep(l358c) mutant (Protein from Escherichia coli)
- Fab (Complex from Mus musculus)
- Rsep (Complex from Escherichia coli)
Structure of the human sodium/bile acid cotransporter (NTCP) in complex with Fab and nanobody
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 7zyi
Q-score: 0.502
Liu H, Irobalieva RN, Bang-Sorensen R, Nosol K, Mukherjee S, Agrawal P, Stieger B, Kossiakoff AA, Locher KP
Cell Res (2022) 32 pp. 773-776 [ Pubmed: 35726088 DOI: doi:10.1038/s41422-022-00680-4 ]
- Nanobody (13 kDa, Protein from Lama glama)
- Sodium/bile acid cotransporter (ntcp) in complex with fab and nanobody (110 kDa, Complex from Homo sapiens)
- Heavy chain of fab (25 kDa, Protein from Mus musculus)
- Sodium ion (22 Da, Ligand)
- Sodium/bile acid cotransporter (38 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Light chain of fab (23 kDa, Protein from Mus musculus)
- Glycochenodeoxycholic acid (449 Da, Ligand)
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 5xs7
Q-score: 0.5
Xu L, Zheng Q, Li S, He M, Wu Y, Li Y, Zhu R, Yu H, Hong Q, Jiang J, Li Z, Li S, Zhao H, Yang L, Hou W, Wang W, Ye X, Zhang J, Baker TS, Cheng T, Zhou ZH, Yan X, Xia N
Nat Commun (2017) 8 pp. 505-505 [ Pubmed: 28894095 DOI: doi:10.1038/s41467-017-00477-9 ]
- Structure of coxsackievirus a6 (cva6) virus a-particle in complex with the neutralizing antibody fragment 1d5 (Complex from Coxsackievirus A6)
- Heavy chain of fab 1d5 (13 kDa, Protein from Mus musculus)
- Genome polyprotein (33 kDa, Protein from Coxsackievirus A6)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus A6)
- Genome polyprotein (28 kDa, Protein from Coxsackievirus A6)
- Light chain of fab 1d5 (11 kDa, Protein from Mus musculus)