IHECRE00003703.5 PREVIOUS JSON  


Type Single donor
Status Complete
Project ENCODE
Description Reference epigenome for mouse limb (10.5 day embryonic)
Live version IHECRE00003703.6
Previous versions IHECRE00003703.4   IHECRE00003703.3   IHECRE00003703.2   IHECRE00003703.1  

Metadata


Disease ontology curie https://ncit.nci.nih.gov/ncitbrowser/pages/multiple_search.jsf?nav_type=terminologies
Biomaterial type Primary Tissue
Donor id ENCDO956IXV
Donor life stage embryonic
Donor ethnicity NA
Donor sex Mixed
Donor age unit day
Tissue type limb
Taxon id 10090
Species Mus musculus
Disease NA
Donor age 10
Collection method unknown
Donor health status ontology curie https://ncit.nci.nih.gov/ncitbrowser/pages/multiple_search.jsf?nav_type=terminologies
Treatment NA
Sample ontology curie http://purl.obolibrary.org/obo/UBERON_0002101
Tissue depot limb
Donor health status NA

Raw data


Assay Type Experiment Type Archive Primary ID Secondary ID URL
ChIP-Seq Histone H3K4me1 ENCODE ENCSR238SGC None https://www.encodeproject.org/experiments/ENCSR238SGC
ChIP-Seq Histone H3K36me3 ENCODE ENCSR242PHH None https://www.encodeproject.org/experiments/ENCSR242PHH
ChIP-Seq Histone H3K4me3 ENCODE ENCSR318QFY None https://www.encodeproject.org/experiments/ENCSR318QFY
Bisulfite-Seq DNA Methylation ENCODE ENCSR377CZO None https://www.encodeproject.org/experiments/ENCSR377CZO
ChIP-Seq ChIP-Seq Input ENCODE ENCSR687ALB None https://www.encodeproject.org/experiments/ENCSR687ALB
miRNA-Seq smRNA-Seq ENCODE ENCSR715NEZ None https://www.encodeproject.org/experiments/ENCSR715NEZ
ChIP-Seq Histone H3K27ac ENCODE ENCSR863VHE None https://www.encodeproject.org/experiments/ENCSR863VHE
ChIP-Seq Histone H3K9me3 ENCODE ENCSR890ACP None https://www.encodeproject.org/experiments/ENCSR890ACP
ChIP-Seq Histone H3K27me3 ENCODE ENCSR906RTN None https://www.encodeproject.org/experiments/ENCSR906RTN
RNA-Seq mRNA-Seq ENCODE ENCSR968QHO None https://www.encodeproject.org/experiments/ENCSR968QHO
DNase-Hypersensitivity Chromatin Accessibility ENCODE ENCSR380VCU None https://www.encodeproject.org/experiments/ENCSR380VCU