GWAS Catalog

Gene: PRKG2

Gene information

Gene name

PRKG2

Description

protein kinase cGMP-dependent 2

Location

4:81087370-81215222

Cytogenetic region

Biotype

protein_coding

Available data:

Associations 129

Show entries

Variant and risk allele	P-value	P-value annotation	RAF	OR	Beta	CI	Mapped gene	Reported trait	Trait(s)	Background trait(s)	Study accession	Location

rs3796804-?	9 x 10^-6	-	NR	-	-	-	PRKG2	HIV-1 susceptibility	HIV-1 infection, Susceptibility to viral and mycobacterial infections	-	GCST001353	4:81088553
rs41332544-?	4 x 10^-12	-	NR	-	-	-	PRKG2	Adolescent idiopathic scoliosis	adolescent idiopathic scoliosis	-	GCST006287	4:81203180
rs984924-?	5 x 10^-8	(alphaCz)	NR	-	5.461 z score increase	-	PRKG2	Electroencephalogram traits	electroencephalogram measurement	-	GCST006684	4:81199758
rs17484474-?	6 x 10^-7	(SBP,Pack-years)	NR	-	-	-	PRKG2	Blood pressure (smoking interaction)	pack-years measurement, systolic blood pressure	-	GCST002587	4:81204967
rs3822224-?	7 x 10^-10	-	NR	-	0.018303063 unit increase	[0.012-0.024]	PRKG2	Height	body height	-	GCST008839	4:81089619

Showing 1 to 5 of 129 entries

Studies79

Show entries

First author	Study accession	Pub. date	Journal	Title	Reported trait	Trait(s)	Background trait(s)	Discovery sample number	Replication sample number	Association count	Summary statistics

First author	Study accession	Pub. date	Journal	Title	Reported trait	Trait(s)	Background trait(s)	Discovery sample number	Replication sample number	Association count	Summary statistics

Lingappa JR	GCST001353	2011-12-12	PLoS One	Genomewide association study for determinants of…	HIV-1 susceptibility	HIV-1 infection, Susceptibility to viral and mycobacterial infections	-	• 798 Sub-Saharan African, African unspecified		9	Not available
Smit DJA	GCST006684	2018-06-26	Hum Brain Mapp	Genome-wide association analysis links multiple…	Electroencephalogram traits	electroencephalogram measurement	-	• 8425 European, NR		8	Not available
Yang JS	GCST90428476	2023-09-21	Clin Cosmet Investig Dermatol	Genome-Wide Association Study of Alopecia Areata…	Alopecia areata	alopecia	-	• 8575 East Asian		7	Not available
Francis M	GCST90161196	2024-07-11	PLoS Genet	Gene-vegetarianism interactions in calcium,…	Total protein levels x vegetarianism interaction	total blood protein measurement, diet measurement	-	• 134454 European		10	FTP Download
Francis M	GCST90161226	2024-07-11	PLoS Genet	Gene-vegetarianism interactions in calcium,…	Total protein levels (adjusted for BMI) x vegetarianism interaction	total blood protein measurement, diet measurement	-	• 134161 European		10	FTP Download

Showing 1 to 5 of 79 entries