Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 37U

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 51


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N25 N N25 N N N 0 -3.373 -1.945 0.821
2 C7 C C7 R N N 0 -3.074 -0.603 0.303
3 C6 C C6 N N N 0 -1.631 -0.543 -0.129
4 O27 O O27 N N N 0 -1.025 -1.566 -0.364
5 C8 C C8 N N N 0 -3.978 -0.305 -0.895
6 C9 C C9 N Y N 0 -5.413 -0.245 -0.438
7 C10 C C10 N Y N 0 -5.956 0.957 -0.023
8 C14 C C14 N Y N 0 -6.187 -1.39 -0.439
9 C11 C C11 N Y N 0 -7.272 1.013 0.396
10 C13 C C13 N Y N 0 -7.502 -1.335 -0.016
11 C12 C C12 N Y N 0 -8.045 -0.133 0.4
12 N15 N N15 N N N 0 -1.015 0.649 -0.255
13 C5 C C5 S N N 0 0.382 0.853 -0.667
14 C4 C C4 N N N 0 1.309 0.197 0.324
15 O26 O O26 N N N 0 0.854 -0.387 1.285
16 C17 C C17 N N N 0 0.635 2.375 -0.694
17 C16 C C16 N N N 0 -0.794 2.962 -0.844
18 C15 C C15 N N N 0 -1.63 1.965 -0.003
19 C1 C C1 N Y N 0 5.666 0.948 1.113
20 C2 C C2 N Y N 0 4.972 -0.165 0.675
21 C19 C C19 N Y N 0 6.899 -0.884 -0.552
22 C3 C C3 N N N 0 3.543 -0.379 1.106
23 N9 N N9 N N N 0 2.643 0.259 0.142
24 C18 C C18 N Y N 0 5.587 -1.081 -0.157
25 F7 F F7 N N N 0 7.502 -1.779 -1.366
26 C20 C C20 N Y N 0 7.594 0.231 -0.113
27 C21 C C21 N Y N 0 6.977 1.145 0.719
28 HN25 H HN25 N N N 0 -3.217 -2.648 0.115
29 HN2A H HN2A N N N 0 -2.835 -2.14 1.652
30 H7 H H7 N N N 0 -3.25 0.136 1.084
31 H8 H H8 N N N 0 -3.696 0.651 -1.334
32 H8A H H8A N N N 0 -3.867 -1.094 -1.639
33 H10 H H10 N N N 0 -5.352 1.852 -0.026
34 H14 H H14 N N N 0 -5.764 -2.328 -0.767
35 H11 H H11 N N N 0 -7.696 1.951 0.721
36 H13 H H13 N N N 0 -8.106 -2.23 -0.012
37 H12 H H12 N N N 0 -9.073 -0.09 0.728
38 H5 H H5 N N N 0 0.541 0.43 -1.659
39 H17 H H17 N N N 0 1.092 2.707 0.238
40 H17A H H17A N N N 0 1.255 2.648 -1.547
41 H16 H H16 N N N 0 -1.111 2.954 -1.887
42 H16A H H16A N N N 0 -0.849 3.967 -0.428
43 H15 H H15 N N N 0 -2.669 1.968 -0.332
44 H15A H H15A N N N 0 -1.566 2.217 1.056
45 H1 H H1 N N N 0 5.183 1.666 1.759
46 H3 H H3 N N N 0 3.333 -1.447 1.148
47 H3A H H3A N N N 0 3.391 0.061 2.092
48 HN9 H HN9 N N N 0 3.006 0.726 -0.626
49 H18 H H18 N N N 0 5.045 -1.95 -0.498
50 H20 H H20 N N N 0 8.618 0.385 -0.42
51 H21 H H21 N N N 0 7.518 2.015 1.061