Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 37U    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.38 N Y
2 C1 C21 C C sing 1.38 N Y
3 C2 C3 C C sing 1.51 N N
4 C2 C18 C C sing 1.38 N Y
5 C3 N9 C N sing 1.47 N N
6 N9 C4 N C sing 1.35 N N
7 C4 O26 C O doub 1.21 N N
8 C4 C5 C C sing 1.51 N N
9 C5 N15 C N sing 1.47 N N
10 C5 C17 C C sing 1.54 N N
11 N15 C6 N C sing 1.35 N N
12 N15 C15 N C sing 1.47 N N
13 C6 O27 C O doub 1.21 N N
14 C6 C7 C C sing 1.51 N N
15 C7 N25 C N sing 1.47 N N
16 C7 C8 C C sing 1.53 N N
17 C8 C9 C C sing 1.51 N N
18 C9 C10 C C doub 1.38 N Y
19 C9 C14 C C sing 1.38 N Y
20 C10 C11 C C sing 1.38 N Y
21 C11 C12 C C doub 1.38 N Y
22 C12 C13 C C sing 1.38 N Y
23 C13 C14 C C doub 1.38 N Y
24 C15 C16 C C sing 1.55 N N
25 C16 C17 C C sing 1.55 N N
26 C18 C19 C C doub 1.38 N Y
27 C19 F7 C F sing 1.35 N N
28 C19 C20 C C sing 1.39 N Y
29 C20 C21 C C doub 1.38 N Y
30 C1 H1 C H sing 1.08 N N
31 C3 H3 C H sing 1.09 N N
32 C3 H3A C H sing 1.09 N N
33 N9 HN9 N H sing 0.97 N N
34 C5 H5 C H sing 1.09 N N
35 C7 H7 C H sing 1.09 N N
36 N25 HN25 N H sing 1.01 N N
37 N25 HN2A N H sing 1.01 N N
38 C8 H8 C H sing 1.09 N N
39 C8 H8A C H sing 1.09 N N
40 C10 H10 C H sing 1.08 N N
41 C11 H11 C H sing 1.08 N N
42 C12 H12 C H sing 1.08 N N
43 C13 H13 C H sing 1.08 N N
44 C14 H14 C H sing 1.08 N N
45 C15 H15 C H sing 1.09 N N
46 C15 H15A C H sing 1.09 N N
47 C16 H16 C H sing 1.09 N N
48 C16 H16A C H sing 1.09 N N
49 C17 H17 C H sing 1.09 N N
50 C17 H17A C H sing 1.09 N N
51 C18 H18 C H sing 1.08 N N
52 C20 H20 C H sing 1.08 N N
53 C21 H21 C H sing 1.08 N N