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PDBeChem : Atoms of Molecule
Molecule : 4GD
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 38
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
N01 |
N |
N1 |
N |
N |
N |
0 |
-0.361 |
-0.091 |
-0.002 |
2 |
C02 |
C |
C1 |
N |
N |
N |
0 |
0.902 |
-0.562 |
-0.004 |
3 |
O03 |
O |
O1 |
N |
N |
N |
0 |
1.104 |
-1.763 |
0.014 |
4 |
C04 |
C |
C2 |
N |
Y |
N |
0 |
2.032 |
0.371 |
-0.03 |
5 |
C05 |
C |
C3 |
N |
Y |
N |
0 |
1.957 |
1.775 |
-0.052 |
6 |
N06 |
N |
N2 |
N |
Y |
N |
0 |
3.171 |
2.259 |
-0.069 |
7 |
N07 |
N |
N3 |
N |
Y |
N |
0 |
4.094 |
1.208 |
-0.06 |
8 |
C08 |
C |
C4 |
N |
Y |
N |
0 |
3.398 |
0.032 |
-0.03 |
9 |
N09 |
N |
N4 |
N |
Y |
N |
0 |
4.036 |
-1.139 |
-0.015 |
10 |
C10 |
C |
C5 |
N |
Y |
N |
0 |
5.35 |
-1.191 |
-0.029 |
11 |
C11 |
C |
C6 |
N |
Y |
N |
0 |
6.1 |
-0.01 |
-0.059 |
12 |
C12 |
C |
C7 |
N |
Y |
N |
0 |
5.457 |
1.186 |
-0.07 |
13 |
C13 |
C |
C8 |
N |
Y |
N |
0 |
-1.436 |
-0.979 |
0.022 |
14 |
C14 |
C |
C9 |
N |
Y |
N |
0 |
-1.358 |
-2.338 |
0.045 |
15 |
C15 |
C |
C10 |
N |
Y |
N |
0 |
-2.661 |
-2.842 |
0.064 |
16 |
N16 |
N |
N5 |
N |
Y |
N |
0 |
-3.496 |
-1.834 |
0.054 |
17 |
N17 |
N |
N6 |
N |
Y |
N |
0 |
-2.755 |
-0.645 |
0.033 |
18 |
C18 |
C |
C11 |
N |
N |
N |
0 |
-3.041 |
-4.3 |
0.092 |
19 |
C19 |
C |
C12 |
N |
Y |
N |
0 |
-3.279 |
0.655 |
0.023 |
20 |
C20 |
C |
C13 |
N |
Y |
N |
0 |
-4.46 |
0.924 |
-0.656 |
21 |
C21 |
C |
C14 |
N |
Y |
N |
0 |
-4.974 |
2.205 |
-0.663 |
22 |
C22 |
C |
C15 |
N |
Y |
N |
0 |
-4.314 |
3.221 |
0.004 |
23 |
C23 |
C |
C16 |
N |
Y |
N |
0 |
-3.137 |
2.956 |
0.681 |
24 |
C24 |
C |
C17 |
N |
Y |
N |
0 |
-2.621 |
1.675 |
0.697 |
25 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-0.522 |
0.865 |
-0.012 |
26 |
H2 |
H |
H2 |
N |
N |
N |
0 |
1.048 |
2.358 |
-0.054 |
27 |
H3 |
H |
H3 |
N |
N |
N |
0 |
5.852 |
-2.148 |
-0.016 |
28 |
H4 |
H |
H4 |
N |
N |
N |
0 |
7.179 |
-0.049 |
-0.07 |
29 |
H5 |
H |
H5 |
N |
N |
N |
0 |
6.019 |
2.108 |
-0.094 |
30 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-0.45 |
-2.922 |
0.047 |
31 |
H7 |
H |
H7 |
N |
N |
N |
0 |
-3.125 |
-4.634 |
1.126 |
32 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-3.998 |
-4.435 |
-0.412 |
33 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-2.276 |
-4.884 |
-0.419 |
34 |
H10 |
H |
H10 |
N |
N |
N |
0 |
-4.976 |
0.131 |
-1.178 |
35 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-5.892 |
2.415 |
-1.192 |
36 |
H12 |
H |
H12 |
N |
N |
N |
0 |
-4.718 |
4.222 |
-0.003 |
37 |
H13 |
H |
H13 |
N |
N |
N |
0 |
-2.626 |
3.75 |
1.205 |
38 |
H14 |
H |
H14 |
N |
N |
N |
0 |
-1.702 |
1.469 |
1.226 |
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