Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 4GD    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 C11 C C doub 1.36 N Y
2 C12 N07 C N sing 1.36 N Y
3 C11 C10 C C sing 1.4 N Y
4 N06 N07 N N sing 1.4 N Y
5 N06 C05 N C doub 1.31 N Y
6 N07 C08 N C sing 1.37 N Y
7 C10 N09 C N doub 1.32 N Y
8 C05 C04 C C sing 1.41 N Y
9 C08 N09 C N sing 1.33 N Y
10 C08 C04 C C doub 1.41 N Y
11 C04 C02 C C sing 1.47 N N
12 C02 O03 C O doub 1.22 N N
13 C02 N01 C N sing 1.35 N N
14 C23 C24 C C doub 1.38 N Y
15 C23 C22 C C sing 1.38 N Y
16 N01 C13 N C sing 1.39 N N
17 C24 C19 C C sing 1.39 N Y
18 C22 C21 C C doub 1.38 N Y
19 C13 N17 C N sing 1.36 N Y
20 C13 C14 C C doub 1.36 N Y
21 C19 N17 C N sing 1.4 N N
22 C19 C20 C C doub 1.39 N Y
23 N17 N16 N N sing 1.4 N Y
24 C14 C15 C C sing 1.4 N Y
25 C21 C20 C C sing 1.38 N Y
26 N16 C15 N C doub 1.31 N Y
27 C15 C18 C C sing 1.51 N N
28 N01 H1 N H sing 0.97 N N
29 C05 H2 C H sing 1.08 N N
30 C10 H3 C H sing 1.08 N N
31 C11 H4 C H sing 1.08 N N
32 C12 H5 C H sing 1.08 N N
33 C14 H6 C H sing 1.08 N N
34 C18 H7 C H sing 1.09 N N
35 C18 H8 C H sing 1.09 N N
36 C18 H9 C H sing 1.09 N N
37 C20 H10 C H sing 1.08 N N
38 C21 H11 C H sing 1.08 N N
39 C22 H12 C H sing 1.08 N N
40 C23 H13 C H sing 1.08 N N
41 C24 H14 C H sing 1.08 N N