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PDBeChem : Atoms of Molecule
Molecule : 5LK
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 56
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
N1 |
N |
N1 |
N |
Y |
N |
0 |
2.075 |
1.664 |
-0.655 |
2 |
N2 |
N |
N2 |
N |
Y |
N |
0 |
1.535 |
1.629 |
-1.934 |
3 |
C3 |
C |
C3 |
N |
Y |
N |
0 |
0.438 |
0.912 |
-1.914 |
4 |
C5 |
C |
C5 |
N |
Y |
N |
0 |
0.225 |
0.451 |
-0.599 |
5 |
C6 |
C |
C6 |
N |
Y |
N |
0 |
1.259 |
0.935 |
0.173 |
6 |
N7 |
N |
N7 |
N |
N |
N |
0 |
1.523 |
0.788 |
1.501 |
7 |
C8 |
C |
C8 |
N |
N |
N |
0 |
2.714 |
1.063 |
1.929 |
8 |
C10 |
C |
C10 |
R |
N |
N |
0 |
3.824 |
1.503 |
1.018 |
9 |
C11 |
C |
C11 |
R |
N |
N |
0 |
3.29 |
2.32 |
-0.163 |
10 |
N12 |
N |
N12 |
N |
N |
N |
0 |
2.972 |
3.684 |
0.281 |
11 |
C15 |
C |
C15 |
N |
Y |
N |
0 |
4.54 |
0.287 |
0.491 |
12 |
C16 |
C |
C16 |
N |
Y |
N |
0 |
5.889 |
0.115 |
0.745 |
13 |
C18 |
C |
C18 |
N |
Y |
N |
0 |
6.547 |
-0.999 |
0.263 |
14 |
C20 |
C |
C20 |
N |
Y |
N |
0 |
5.855 |
-1.947 |
-0.477 |
15 |
C21 |
C |
C21 |
N |
Y |
N |
0 |
4.503 |
-1.772 |
-0.731 |
16 |
C23 |
C |
C23 |
N |
Y |
N |
0 |
3.847 |
-0.659 |
-0.242 |
17 |
O25 |
O |
O25 |
N |
N |
N |
0 |
6.501 |
-3.044 |
-0.953 |
18 |
C27 |
C |
C27 |
N |
Y |
N |
0 |
-0.9 |
-0.394 |
-0.134 |
19 |
C28 |
C |
C28 |
N |
Y |
N |
0 |
-2.212 |
-0.049 |
-0.453 |
20 |
C30 |
C |
C30 |
N |
Y |
N |
0 |
-3.26 |
-0.844 |
-0.015 |
21 |
C31 |
C |
C31 |
N |
Y |
N |
0 |
-3.0 |
-1.981 |
0.741 |
22 |
C33 |
C |
C33 |
N |
Y |
N |
0 |
-1.699 |
-2.323 |
1.058 |
23 |
C35 |
C |
C35 |
N |
Y |
N |
0 |
-0.649 |
-1.54 |
0.62 |
24 |
N37 |
N |
N37 |
N |
N |
N |
0 |
-4.577 |
-0.502 |
-0.332 |
25 |
C38 |
C |
C38 |
N |
N |
N |
0 |
-5.524 |
-1.475 |
0.229 |
26 |
C41 |
C |
C41 |
N |
N |
N |
0 |
-6.945 |
-1.11 |
-0.206 |
27 |
N44 |
N |
N44 |
N |
N |
N |
0 |
-7.26 |
0.251 |
0.251 |
28 |
C45 |
C |
C45 |
N |
N |
N |
0 |
-6.313 |
1.224 |
-0.31 |
29 |
C48 |
C |
C48 |
N |
N |
N |
0 |
-4.892 |
0.859 |
0.125 |
30 |
C51 |
C |
C51 |
N |
N |
N |
0 |
-8.644 |
0.61 |
-0.083 |
31 |
H3 |
H |
H3 |
N |
N |
N |
0 |
-0.197 |
0.708 |
-2.764 |
32 |
H8 |
H |
H8 |
N |
N |
N |
0 |
2.918 |
0.973 |
2.985 |
33 |
H10 |
H |
H10 |
N |
N |
N |
0 |
4.528 |
2.114 |
1.583 |
34 |
HN12 |
H |
HN12 |
N |
N |
N |
0 |
2.596 |
4.233 |
-0.477 |
35 |
H16 |
H |
H16 |
N |
N |
N |
0 |
6.427 |
0.853 |
1.321 |
36 |
H18 |
H |
H18 |
N |
N |
N |
0 |
7.601 |
-1.133 |
0.462 |
37 |
H21 |
H |
H21 |
N |
N |
N |
0 |
3.961 |
-2.509 |
-1.307 |
38 |
H23 |
H |
H23 |
N |
N |
N |
0 |
2.793 |
-0.525 |
-0.435 |
39 |
HO25 |
H |
HO25 |
N |
N |
N |
0 |
6.493 |
-3.798 |
-0.348 |
40 |
H28 |
H |
H28 |
N |
N |
N |
0 |
-2.411 |
0.836 |
-1.04 |
41 |
H31 |
H |
H31 |
N |
N |
N |
0 |
-3.817 |
-2.6 |
1.082 |
42 |
H33 |
H |
H33 |
N |
N |
N |
0 |
-1.502 |
-3.207 |
1.646 |
43 |
H35 |
H |
H35 |
N |
N |
N |
0 |
0.367 |
-1.813 |
0.865 |
44 |
H38 |
H |
H38 |
N |
N |
N |
0 |
-5.277 |
-2.473 |
-0.133 |
45 |
H38A |
H |
H38A |
N |
N |
N |
0 |
-5.461 |
-1.458 |
1.317 |
46 |
H41 |
H |
H41 |
N |
N |
N |
0 |
-7.015 |
-1.154 |
-1.293 |
47 |
H41A |
H |
H41A |
N |
N |
N |
0 |
-7.652 |
-1.814 |
0.233 |
48 |
H45 |
H |
H45 |
N |
N |
N |
0 |
-6.375 |
1.207 |
-1.398 |
49 |
H45A |
H |
H45A |
N |
N |
N |
0 |
-6.559 |
2.222 |
0.052 |
50 |
H48 |
H |
H48 |
N |
N |
N |
0 |
-4.822 |
0.903 |
1.212 |
51 |
H48A |
H |
H48A |
N |
N |
N |
0 |
-4.185 |
1.563 |
-0.314 |
52 |
H51 |
H |
H51 |
N |
N |
N |
0 |
-9.328 |
-0.088 |
0.401 |
53 |
H51A |
H |
H51A |
N |
N |
N |
0 |
-8.851 |
1.622 |
0.267 |
54 |
H51B |
H |
H51B |
N |
N |
N |
0 |
-8.782 |
0.564 |
-1.163 |
55 |
H25 |
H |
H25 |
N |
N |
N |
0 |
4.037 |
2.354 |
-0.955 |
56 |
H26 |
H |
H26 |
N |
N |
N |
0 |
2.339 |
3.67 |
1.066 |
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