Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8LQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N9 N N1 N Y N 0 -3.356 0.331 -0.081
2 C8 C C1 N Y N 0 -3.009 1.168 -1.099
3 N7 N N2 N Y N 0 -3.958 2.033 -1.307
4 C5 C C2 N Y N 0 -4.972 1.808 -0.438
5 C6 C C3 N Y N 0 -6.221 2.406 -0.199
6 N6 N N3 N N N 0 -6.644 3.487 -0.953
7 N1 N N4 N Y N 0 -6.987 1.909 0.767
8 C2 C C4 N Y N 0 -6.592 0.878 1.491
9 N3 N N5 N Y N 0 -5.431 0.286 1.303
10 C4 C C5 N Y N 0 -4.598 0.713 0.36
11 CAA C C6 N N N 0 8.213 2.678 1.438
12 CAZ C C7 S N N 0 7.392 1.775 0.516
13 OAE O O1 N N N 0 7.241 2.405 -0.757
14 CAL C C8 N N N 0 6.013 1.534 1.133
15 CAS C C9 N N N 0 5.25 0.547 0.288
16 OAC O O2 N N N 0 5.757 0.084 -0.706
17 OAQ O O3 N N N 0 4.006 0.183 0.639
18 PBC P P1 N N N 0 3.258 -0.875 -0.315
19 OAH O O4 N N N 0 4.037 -2.283 -0.271
20 OAD O O5 N N N 0 3.243 -0.363 -1.704
21 O5' O O6 N N N 0 1.745 -1.082 0.196
22 C5' C C10 N N N 0 0.79 -1.883 -0.504
23 C4' C C11 R N N 0 -0.541 -1.865 0.251
24 O4' O O7 N N N 0 -1.153 -0.56 0.16
25 C3' C C12 S N N 0 -1.551 -2.823 -0.418
26 O3' O O8 N N N 0 -1.59 -4.072 0.274
27 C2' C C13 R N N 0 -2.905 -2.09 -0.289
28 O2' O O9 N N N 0 -3.822 -2.865 0.487
29 C1' C C14 R N N 0 -2.553 -0.776 0.444
30 H1 H H1 N N N 0 -2.082 1.12 -1.652
31 H2 H H2 N N N 0 -6.076 3.84 -1.655
32 H3 H H3 N N N 0 -7.509 3.891 -0.779
33 H4 H H4 N N N 0 -7.246 0.506 2.266
34 H5 H H5 N N N 0 8.328 2.198 2.41
35 H6 H H6 N N N 0 9.196 2.85 0.999
36 H7 H H7 N N N 0 7.7 3.632 1.563
37 H8 H H8 N N N 0 7.906 0.821 0.391
38 H9 H H9 N N N 0 6.791 3.26 -0.722
39 H10 H H10 N N N 0 6.13 1.135 2.141
40 H11 H H11 N N N 0 5.465 2.476 1.176
41 H12 H H12 N N N 0 4.085 -2.678 0.611
42 H13 H H13 N N N 0 0.644 -1.481 -1.507
43 H14 H H14 N N N 0 1.155 -2.907 -0.572
44 H15 H H15 N N N 0 -0.388 -2.142 1.294
45 H16 H H16 N N N 0 -1.298 -2.974 -1.467
46 H17 H H17 N N N 0 -2.209 -4.712 -0.104
47 H18 H H18 N N N 0 -3.321 -1.878 -1.274
48 H19 H H19 N N N 0 -4.032 -3.727 0.103
49 H20 H H20 N N N 0 -2.71 -0.885 1.516