Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : A1AH3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 3.773 -0.736 3.369
2 N3 N N2 N Y N 0 3.826 -2.543 -0.065
3 C4 C C1 N N N 0 4.056 -0.257 2.379
4 C5 C C2 R N N 0 2.717 1.89 0.92
5 C6 C C3 N N N 0 1.794 2.607 -0.067
6 C7 C C4 N N N 0 -5.593 0.031 -0.818
7 C8 C C5 R N N 0 -6.049 -1.097 0.109
8 C10 C C6 R N N 0 -8.055 -1.679 1.363
9 C13 C C7 N Y N 0 6.608 -0.275 -0.049
10 C15 C C8 N Y N 0 6.082 -2.302 -0.816
11 C17 C C9 N Y N 0 5.963 -3.59 -1.387
12 C1 C C10 S N N 0 3.963 2.752 1.216
13 C11 C C11 R N N 0 -6.782 -1.574 2.232
14 C12 C C12 N Y N 0 5.327 -0.552 0.311
15 C14 C C13 N Y N 0 7.1 -1.37 -0.762
16 C16 C C14 N Y N 0 3.782 -3.726 -0.614
17 C2 C C15 R N N 0 5.111 1.725 1.334
18 C3 C C16 R N N 0 4.423 0.363 1.095
19 C9 C C17 S N N 0 -7.562 -1.357 -0.065
20 N2 N N3 N Y N 0 4.995 -1.774 -0.146
21 N4 N N4 N Y N 0 4.822 -4.248 -1.263
22 N5 N N5 N N N 0 7.024 -4.155 -2.065
23 O1 O O1 N N N 0 3.8 3.464 2.445
24 O10 O O2 N N N 0 -3.462 0.938 -3.14
25 O11 O O3 N N N 0 -3.911 2.619 -1.311
26 O12 O O4 N N N 0 -0.05 2.312 -2.764
27 O13 O O5 N N N 0 -1.048 3.636 -0.861
28 O14 O O6 N N N 0 5.692 1.77 2.639
29 O2 O O7 N N N 0 3.235 0.676 0.333
30 O3 O O8 N N N 0 0.611 1.83 -0.265
31 O4 O O9 N N N 0 -1.803 1.242 -1.123
32 O5 O O10 N N N 0 -4.174 0.177 -0.727
33 O6 O O11 N N N 0 -5.9 -0.703 1.491
34 O7 O O12 N N N 0 -7.094 -1.001 3.504
35 O8 O O13 N N N 0 -8.594 -3.001 1.422
36 O9 O O14 N N N 0 -7.781 -2.472 -0.933
37 H5 H H2 N N N 0 1.524 3.585 0.333
38 P1 P P1 N N N 0 -0.583 2.285 -1.245
39 P2 P P2 N N N 0 -3.35 1.274 -1.57
40 H4 H H1 N N N 0 2.182 1.666 1.844
41 H6 H H3 N N N 0 2.309 2.734 -1.019
42 H7 H H4 N N N 0 -5.868 -0.21 -1.845
43 H8 H H5 N N N 0 -6.074 0.963 -0.521
44 H9 H H6 N N N 0 -5.482 -2.006 -0.091
45 H11 H H7 N N N 0 -8.799 -0.949 1.686
46 H16 H H8 N N N 0 7.15 0.631 0.176
47 H2 H H9 N N N 0 4.153 3.444 0.395
48 H12 H H10 N N N 0 -6.328 -2.556 2.359
49 H17 H H11 N N N 0 8.087 -1.47 -1.188
50 H18 H H12 N N N 0 2.872 -4.302 -0.54
51 H3 H H13 N N N 0 5.868 1.909 0.571
52 H10 H H14 N N N 0 -8.061 -0.468 -0.451
53 H19 H H15 N N N 0 7.859 -3.667 -2.152
54 H20 H H16 N N N 0 6.937 -5.039 -2.454
55 H1 H H17 N N N 0 4.577 3.975 2.709
56 H22 H H18 N N N 0 -3.112 0.07 -3.383
57 H23 H H19 N N N 0 0.272 1.458 -3.083
58 H21 H H20 N N N 0 6.086 2.624 2.864
59 H13 H H21 N N N 0 -6.331 -0.911 4.092
60 H14 H H22 N N N 0 -8.864 -3.276 2.309
61 H15 H H23 N N N 0 -8.715 -2.68 -1.077