Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : A1AH3    

Bonds between two atoms of the molecule

Total Number of Bonds: 64


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C1 O C sing 1.43 N N
2 C1 C2 C C sing 1.54 N N
3 C2 C3 C C sing 1.54 N N
4 C3 C4 C C sing 1.47 N N
5 C4 N1 C N trip 1.14 N N
6 C3 O2 C O sing 1.45 N N
7 O2 C5 O C sing 1.44 N N
8 C5 C6 C C sing 1.53 N N
9 C6 O3 C O sing 1.43 N N
10 O3 P1 O P sing 1.61 N N
11 P1 O4 P O sing 1.61 N N
12 O4 P2 O P sing 1.61 N N
13 P2 O5 P O sing 1.61 N N
14 O5 C7 O C sing 1.43 N N
15 C7 C8 C C sing 1.53 N N
16 C8 C9 C C sing 1.55 N N
17 C9 C10 C C sing 1.54 N N
18 C10 C11 C C sing 1.54 N N
19 C11 O6 C O sing 1.44 N N
20 C11 O7 C O sing 1.43 N N
21 C10 O8 C O sing 1.43 N N
22 C9 O9 C O sing 1.43 N N
23 P2 O10 P O sing 1.61 N N
24 P2 O11 P O doub 1.48 N N
25 P1 O12 P O sing 1.61 N N
26 P1 O13 P O doub 1.48 N N
27 C3 C12 C C sing 1.51 N N
28 C12 C13 C C doub 1.36 N Y
29 C13 C14 C C sing 1.4 N Y
30 C14 C15 C C doub 1.38 N Y
31 C15 N2 C N sing 1.38 N Y
32 N2 N3 N N sing 1.4 N Y
33 N3 C16 N C doub 1.3 N Y
34 C16 N4 C N sing 1.33 N Y
35 N4 C17 N C doub 1.32 N Y
36 C17 N5 C N sing 1.38 N N
37 C2 O14 C O sing 1.43 N N
38 C1 C5 C C sing 1.54 N N
39 C8 O6 C O sing 1.44 N N
40 C12 N2 C N sing 1.35 N Y
41 C15 C17 C C sing 1.41 N Y
42 C5 H4 C H sing 1.09 N N
43 C6 H5 C H sing 1.09 N N
44 C6 H6 C H sing 1.09 N N
45 C7 H7 C H sing 1.09 N N
46 C7 H8 C H sing 1.09 N N
47 C8 H9 C H sing 1.09 N N
48 C10 H11 C H sing 1.09 N N
49 C13 H16 C H sing 1.08 N N
50 C1 H2 C H sing 1.09 N N
51 C11 H12 C H sing 1.09 N N
52 C14 H17 C H sing 1.08 N N
53 C16 H18 C H sing 1.08 N N
54 C2 H3 C H sing 1.09 N N
55 C9 H10 C H sing 1.09 N N
56 N5 H19 N H sing 0.97 N N
57 N5 H20 N H sing 0.97 N N
58 O1 H1 O H sing 0.97 N N
59 O10 H22 O H sing 0.97 N N
60 O12 H23 O H sing 0.97 N N
61 O14 H21 O H sing 0.97 N N
62 O7 H13 O H sing 0.97 N N
63 O8 H14 O H sing 0.97 N N
64 O9 H15 O H sing 0.97 N N