Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : BM1

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 S1 S S1 N N N 0 -1.306 1.892 0.063
2 C2 C C2 N N N 0 -3.021 1.216 0.009
3 C3 C C3 N N N 0 -2.734 -0.305 -0.12
4 C5 C C5 R N N 0 -0.395 0.308 -0.15
5 N4 N N4 N N N 0 -1.452 -0.516 -0.807
6 C6 C C6 N N N 0 -0.853 -1.159 -1.826
7 OE O OE N N N 0 -1.274 -2.166 -2.362
8 C7 C C7 N Y N 0 0.391 -0.456 -2.195
9 C12 C C12 N Y N 0 0.697 0.468 -1.169
10 C8 C C8 N Y N 0 1.252 -0.572 -3.285
11 C9 C C9 N Y N 0 2.366 0.237 -3.372
12 C10 C C10 N Y N 0 2.637 1.158 -2.376
13 C11 C C11 N Y N 0 1.796 1.268 -1.281
14 C13 C C13 N Y N 0 0.093 -0.272 1.15
15 C14 C C14 N Y N 0 0.433 0.564 2.197
16 C15 C C15 N Y N 0 0.888 0.031 3.388
17 CA C CA N N N 0 1.263 0.943 4.527
18 C16 C C16 N Y N 0 0.993 -1.339 3.537
19 C17 C C17 N Y N 0 0.649 -2.176 2.492
20 C18 C C18 N Y N 0 0.199 -1.642 1.298
21 H21 H 1H2 N N N 0 -3.56 1.437 0.93
22 H22 H 2H2 N N N 0 -3.563 1.589 -0.859
23 H31 H 1H3 N N N 0 -2.69 -0.751 0.873
24 H101 H 1H10 N N N 0 3.506 1.794 -2.452
25 H32 H 2H3 N N N 0 -3.533 -0.777 -0.692
26 H81 H 1H8 N N N 0 1.049 -1.296 -4.061
27 H91 H 1H9 N N N 0 3.029 0.151 -4.22
28 H111 H 1H11 N N N 0 2.013 1.986 -0.504
29 H141 H 1H14 N N N 0 0.351 1.634 2.081
30 HA1 H 1HA N N N 0 2.32 1.199 4.455
31 HA2 H 2HA N N N 0 0.664 1.852 4.477
32 HA3 H 3HA N N N 0 1.076 0.437 5.475
33 H161 H 1H16 N N N 0 1.344 -1.756 4.469
34 H171 H 1H17 N N N 0 0.731 -3.246 2.608
35 H181 H 1H18 N N N 0 -0.068 -2.296 0.481