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PDBeChem : Atoms of Molecule
Molecule : BPG
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 39
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C3' |
C |
C3* |
N |
N |
N |
0 |
0.69 |
1.078 |
4.838 |
2 |
O3' |
O |
O3* |
N |
N |
N |
0 |
0.136 |
0.721 |
6.106 |
3 |
C2' |
C |
C2* |
N |
N |
N |
0 |
0.792 |
-0.168 |
3.958 |
4 |
C12 |
C |
C12 |
N |
N |
N |
0 |
1.386 |
0.213 |
2.6 |
5 |
C1' |
C |
C1* |
N |
N |
N |
0 |
1.488 |
-1.033 |
1.719 |
6 |
N9 |
N |
N9 |
N |
Y |
N |
0 |
2.056 |
-0.668 |
0.419 |
7 |
C4 |
C |
C4 |
N |
Y |
N |
0 |
1.355 |
-0.279 |
-0.689 |
8 |
N3 |
N |
N3 |
N |
N |
N |
0 |
0.057 |
-0.099 |
-0.956 |
9 |
C2 |
C |
C2 |
N |
N |
N |
0 |
-0.344 |
0.297 |
-2.143 |
10 |
N2 |
N |
N2 |
N |
N |
N |
0 |
-1.688 |
0.461 |
-2.372 |
11 |
N1 |
N |
N1 |
N |
N |
N |
0 |
0.535 |
0.55 |
-3.153 |
12 |
C6 |
C |
C6 |
N |
N |
N |
0 |
1.863 |
0.397 |
-2.956 |
13 |
O6 |
O |
O6 |
N |
N |
N |
0 |
2.658 |
0.621 |
-3.853 |
14 |
C5 |
C |
C5 |
N |
Y |
N |
0 |
2.309 |
-0.029 |
-1.683 |
15 |
N7 |
N |
N7 |
N |
Y |
N |
0 |
3.526 |
-0.282 |
-1.145 |
16 |
C8 |
C |
C8 |
N |
Y |
N |
0 |
3.381 |
-0.658 |
0.092 |
17 |
C04 |
C |
C04 |
N |
Y |
N |
0 |
-4.448 |
-0.627 |
0.551 |
18 |
C05 |
C |
C05 |
N |
Y |
N |
0 |
-4.705 |
0.454 |
-0.271 |
19 |
C06 |
C |
C06 |
N |
Y |
N |
0 |
-3.792 |
0.818 |
-1.241 |
20 |
C01 |
C |
C01 |
N |
Y |
N |
0 |
-2.615 |
0.096 |
-1.391 |
21 |
C02 |
C |
C02 |
N |
Y |
N |
0 |
-2.363 |
-0.993 |
-0.567 |
22 |
C03 |
C |
C03 |
N |
Y |
N |
0 |
-3.277 |
-1.348 |
0.404 |
23 |
H3'1 |
H |
1H3* |
N |
N |
N |
0 |
0.046 |
1.812 |
4.354 |
24 |
H3'2 |
H |
2H3* |
N |
N |
N |
0 |
1.683 |
1.503 |
4.983 |
25 |
H3' |
H |
H3* |
N |
N |
N |
0 |
0.088 |
1.533 |
6.629 |
26 |
H2'1 |
H |
1H2* |
N |
N |
N |
0 |
1.436 |
-0.903 |
4.442 |
27 |
H2'2 |
H |
2H2* |
N |
N |
N |
0 |
-0.2 |
-0.594 |
3.813 |
28 |
H121 |
H |
1H12 |
N |
N |
N |
0 |
0.742 |
0.947 |
2.116 |
29 |
H122 |
H |
2H12 |
N |
N |
N |
0 |
2.379 |
0.638 |
2.744 |
30 |
H1'1 |
H |
1H1* |
N |
N |
N |
0 |
2.132 |
-1.768 |
2.203 |
31 |
H1'2 |
H |
2H1* |
N |
N |
N |
0 |
0.495 |
-1.459 |
1.575 |
32 |
HN21 |
H |
1HN2 |
N |
N |
N |
0 |
-1.995 |
0.831 |
-3.215 |
33 |
HN1 |
H |
HN1 |
N |
N |
N |
0 |
0.206 |
0.843 |
-4.017 |
34 |
H8 |
H |
H8 |
N |
N |
N |
0 |
4.188 |
-0.921 |
0.759 |
35 |
H041 |
H |
1H04 |
N |
N |
N |
0 |
-5.163 |
-0.909 |
1.309 |
36 |
H051 |
H |
1H05 |
N |
N |
N |
0 |
-5.62 |
1.015 |
-0.154 |
37 |
H061 |
H |
1H06 |
N |
N |
N |
0 |
-3.993 |
1.663 |
-1.882 |
38 |
H021 |
H |
1H02 |
N |
N |
N |
0 |
-1.449 |
-1.557 |
-0.681 |
39 |
H031 |
H |
1H03 |
N |
N |
N |
0 |
-3.08 |
-2.193 |
1.048 |
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