Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GIL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 77


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 8.09 0.39 -4.516
2 C2 C C2 N Y N 0 7.059 1.318 -4.667
3 C3 C C3 N Y N 0 7.273 2.657 -4.342
4 C4 C C4 N Y N 0 8.517 3.069 -3.865
5 C5 C C5 N Y N 0 9.531 2.136 -3.72
6 C6 C C6 N Y N 0 9.335 0.803 -4.039
7 C7 C C7 N N N 0 7.868 -1.006 -4.854
8 N1 N N1 N N N 0 6.668 -1.517 -5.336
9 N2 N N2 N N N 0 8.869 -1.847 -4.695
10 C11 C C11 N Y N 0 10.958 2.511 -1.891
11 C12 C C12 N Y N 0 12.181 2.912 -1.378
12 N3 N N3 N Y N 0 9.924 2.08 -1.134
13 C13 C C13 N Y N 0 12.354 2.867 0.001
14 N4 N N4 N N N 0 13.58 3.264 0.573
15 O1 O O1 N N N 0 10.762 2.545 -3.247
16 C14 C C14 N Y N 0 11.314 2.429 0.813
17 C15 C C15 N Y N 0 10.14 2.054 0.194
18 O2 O O2 N N N 0 9.089 1.613 0.979
19 F1 F F1 N N N 0 13.164 3.328 -2.187
20 F2 F F2 N N N 0 11.45 2.374 2.144
21 C21 C C21 N Y N 0 7.939 1.247 0.348
22 C22 C C22 N Y N 0 7.739 -0.068 -0.071
23 C23 C C23 N Y N 0 6.553 -0.422 -0.716
24 C24 C C24 N Y N 0 5.594 0.547 -0.926
25 C25 C C25 N Y N 0 5.767 1.854 -0.521
26 C26 C C26 N Y N 0 6.953 2.208 0.123
27 C29 C C29 N N N 0 8.754 -1.087 0.156
28 O3 O O3 N N N 0 8.739 -2.056 -0.799
29 O4 O O4 N N N 0 9.552 -1.103 1.097
30 C8 C C8 N N N 0 4.331 0.17 -1.612
31 C10 C C10 N N N 0 14.809 2.58 0.224
32 C16 C C16 N N N 0 13.63 4.37 1.509
33 C17 C C17 N N N 0 15.45 3.284 -0.964
34 C18 C C18 N N N 0 14.492 1.125 -0.088
35 C19 C C19 N N N 0 12.77 4.037 2.72
36 C20 C C20 N N N 0 13.149 5.632 0.807
37 O5 O O5 N N N 0 3.723 1.02 -2.258
38 N5 N N5 N N N 0 3.973 -1.141 -1.466
39 C9 C C9 N N N 0 2.753 -1.678 -2.11
40 C27 C C27 N N N 0 3.044 -2.221 -3.515
41 C28 C C28 N N N 0 4.088 -3.339 -3.501
42 C30 C C30 N N N 0 1.771 -2.682 -4.226
43 H2 H H2 N N N 0 6.086 1.007 -5.038
44 H3 H H3 N N N 0 6.47 3.379 -4.46
45 H4 H H4 N N N 0 8.677 4.114 -3.613
46 H6 H H6 N N N 0 10.141 0.083 -3.919
47 H1N1 H 1H1N N N N 0 6.562 -2.501 -5.562
48 H1N2 H 2H1N N N N 0 5.849 -0.936 -5.47
49 H23 H H23 N N N 0 6.396 -1.448 -1.043
50 H25 H H25 N N N 0 5.006 2.611 -0.691
51 H26 H H26 N N N 0 7.102 3.234 0.448
52 HA H HA N N N 0 9.419 -2.748 -0.655
53 H10 H H10 N N N 0 15.482 2.63 1.087
54 H16 H H16 N N N 0 14.671 4.501 1.823
55 H171 H 1H17 N N N 0 16.392 2.8 -1.242
56 H172 H 2H17 N N N 0 14.79 3.275 -1.838
57 H173 H 3H17 N N N 0 15.665 4.331 -0.725
58 H181 H 1H18 N N N 0 14.024 0.636 0.773
59 H182 H 2H18 N N N 0 15.404 0.572 -0.338
60 H183 H 3H18 N N N 0 13.799 1.038 -0.933
61 H191 H 1H19 N N N 0 12.8 4.848 3.455
62 H192 H 2H19 N N N 0 11.724 3.873 2.435
63 H193 H 3H19 N N N 0 13.124 3.123 3.209
64 H201 H 1H20 N N N 0 13.774 5.851 -0.066
65 H202 H 2H20 N N N 0 13.193 6.494 1.481
66 H203 H 3H20 N N N 0 12.117 5.526 0.455
67 H5 H H5 N N N 0 4.532 -1.814 -0.982
68 H9C1 H 1H9C N N N 0 2.004 -0.881 -2.152
69 H9C2 H 2H9C N N N 0 2.354 -2.476 -1.474
70 H27 H H27 N N N 0 3.464 -1.391 -4.098
71 H281 H 1H28 N N N 0 3.717 -4.237 -2.997
72 H282 H 2H28 N N N 0 4.361 -3.621 -4.523
73 H283 H 3H28 N N N 0 5.001 -3.013 -2.991
74 H301 H 1H30 N N N 0 1.319 -3.547 -3.73
75 H302 H 2H30 N N N 0 1.991 -2.969 -5.26
76 H303 H 3H30 N N N 0 1.029 -1.878 -4.255
77 HN1 H HN1 N N N 0 9.687 -1.343 -4.337