Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GIL    

Bonds between two atoms of the molecule

Total Number of Bonds: 79


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.4 N Y
2 C1 C6 C C doub 1.4 N Y
3 C1 C7 C C sing 1.45 N N
4 C2 C3 C C doub 1.39 N Y
5 C2 H2 C H sing 1.09 N N
6 C3 C4 C C sing 1.39 N Y
7 C3 H3 C H sing 1.09 N N
8 C4 C5 C C doub 1.39 N Y
9 C4 H4 C H sing 1.09 N N
10 C5 C6 C C sing 1.38 N Y
11 C5 O1 C O sing 1.38 N N
12 C6 H6 C H sing 1.09 N N
13 C7 N1 C N sing 1.39 N N
14 C7 N2 C N doub 1.32 N N
15 N1 H1N1 N H sing 1.02 N N
16 N1 H1N2 N H sing 1.01 N N
17 C11 C12 C C doub 1.39 N Y
18 C11 N3 C N sing 1.35 N Y
19 C11 O1 C O sing 1.37 N N
20 C12 C13 C C sing 1.39 N Y
21 C12 F1 C F sing 1.34 N N
22 N3 C15 N C doub 1.35 N Y
23 C13 C14 C C doub 1.39 N Y
24 C13 N4 C N sing 1.41 N N
25 C14 C15 C C sing 1.38 N Y
26 C14 F2 C F sing 1.34 N N
27 C15 O2 C O sing 1.38 N N
28 N4 C10 N C sing 1.45 N N
29 N4 C16 N C sing 1.45 N N
30 O2 C21 O C sing 1.36 N N
31 C21 C22 C C doub 1.39 N Y
32 C21 C26 C C sing 1.4 N Y
33 C22 C23 C C sing 1.4 N Y
34 C22 C29 C C sing 1.46 N N
35 C23 C24 C C doub 1.38 N Y
36 C23 H23 C H sing 1.09 N N
37 C24 C25 C C sing 1.38 N Y
38 C24 C8 C C sing 1.49 N N
39 C25 C26 C C doub 1.4 N Y
40 C25 H25 C H sing 1.09 N N
41 C26 H26 C H sing 1.09 N N
42 C29 O3 C O sing 1.36 N N
43 C29 O4 C O doub 1.23 N N
44 O3 HA O H sing 0.98 N N
45 C8 O5 C O doub 1.23 N N
46 C8 N5 C N sing 1.37 N N
47 C10 C17 C C sing 1.52 N N
48 C10 C18 C C sing 1.52 N N
49 C10 H10 C H sing 1.1 N N
50 C16 C19 C C sing 1.52 N N
51 C16 C20 C C sing 1.52 N N
52 C16 H16 C H sing 1.1 N N
53 C17 H171 C H sing 1.09 N N
54 C17 H172 C H sing 1.1 N N
55 C17 H173 C H sing 1.1 N N
56 C18 H181 C H sing 1.1 N N
57 C18 H182 C H sing 1.1 N N
58 C18 H183 C H sing 1.1 N N
59 C19 H191 C H sing 1.09 N N
60 C19 H192 C H sing 1.1 N N
61 C19 H193 C H sing 1.1 N N
62 C20 H201 C H sing 1.1 N N
63 C20 H202 C H sing 1.1 N N
64 C20 H203 C H sing 1.1 N N
65 N5 C9 N C sing 1.48 N N
66 N5 H5 N H sing 1.0 N N
67 C9 C27 C C sing 1.53 N N
68 C9 H9C1 C H sing 1.09 N N
69 C9 H9C2 C H sing 1.1 N N
70 C27 C28 C C sing 1.53 N N
71 C27 C30 C C sing 1.53 N N
72 C27 H27 C H sing 1.1 N N
73 C28 H281 C H sing 1.09 N N
74 C28 H282 C H sing 1.09 N N
75 C28 H283 C H sing 1.1 N N
76 C30 H301 C H sing 1.09 N N
77 C30 H302 C H sing 1.1 N N
78 C30 H303 C H sing 1.09 N N
79 HN1 N2 H N sing 1.03 N N