Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : IIM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O1 N N N 0 6.953 -1.33 0.805
2 C1 C C1 N N N 0 7.154 -0.175 -1.573
3 S1 S S1 S N N 0 6.712 -0.075 0.183
4 CA1 C C2 N Y N 0 2.824 -1.081 0.151
5 CA2 C C3 N Y N 0 4.202 -1.146 0.182
6 CA3 C C4 N Y N 0 4.953 0.016 0.145
7 CA4 C C5 N Y N 0 4.328 1.249 0.078
8 CA5 C C6 N Y N 0 2.951 1.327 0.047
9 CA6 C C7 N Y N 0 2.188 0.159 0.083
10 NB1 N N1 N Y N 0 -4.668 3.609 -0.196
11 CB2 C C8 N Y N 0 -3.68 3.893 0.632
12 CB3 C C9 N Y N 0 -2.574 3.075 0.722
13 CB4 C C10 N Y N 0 -2.51 1.928 -0.081
14 CB5 C C11 N Y N 0 -3.582 1.666 -0.945
15 CB6 C C12 N Y N 0 -4.649 2.539 -0.97
16 NC1 N N2 N Y N 0 -0.019 1.386 -0.014
17 CC2 C C13 N Y N 0 0.712 0.236 0.051
18 NC3 N N3 N Y N 0 -0.105 -0.793 0.08
19 CC4 C C14 N Y N 0 -1.374 -0.361 0.035
20 CC5 C C15 N Y N 0 -1.347 1.023 -0.02
21 CD1 C C16 N Y N 0 -3.738 -0.778 0.708
22 CD2 C C17 N Y N 0 -4.865 -1.573 0.717
23 CD3 C C18 N Y N 0 -4.854 -2.803 0.078
24 CD4 C C19 N Y N 0 -3.712 -3.24 -0.574
25 CD5 C C20 N Y N 0 -2.58 -2.451 -0.589
26 CD6 C C21 N Y N 0 -2.588 -1.211 0.049
27 FD3 F F1 N N N 0 -5.961 -3.578 0.09
28 H2 H H2 N N N 0 6.698 -1.062 -2.013
29 H3 H H3 N N N 0 6.792 0.713 -2.09
30 H4 H H4 N N N 0 8.238 -0.237 -1.672
31 H5 H H5 N N N 0 2.239 -1.989 0.176
32 H6 H H6 N N N 0 4.695 -2.105 0.234
33 H7 H H7 N N N 0 4.92 2.152 0.05
34 H8 H H8 N N N 0 2.465 2.29 -0.006
35 H9 H H9 N N N 0 -3.738 4.779 1.246
36 H10 H H10 N N N 0 -1.769 3.315 1.401
37 H11 H H11 N N N 0 -3.573 0.794 -1.581
38 H15 H H15 N N N 0 -3.747 0.179 1.207
39 H12 H H12 N N N 0 -5.48 2.346 -1.631
40 H13 H H13 N N N 0 0.331 2.29 -0.047
41 H16 H H16 N N N 0 -5.758 -1.237 1.224
42 H17 H H17 N N N 0 -3.708 -4.199 -1.07
43 H18 H H18 N N N 0 -1.69 -2.793 -1.096