Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IIM    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 FD3 CD3 F C sing 1.35 N N
2 CD4 CD3 C C doub 1.39 N Y
3 CD4 CD5 C C sing 1.38 N Y
4 CD3 CD2 C C sing 1.39 N Y
5 CD5 CD6 C C doub 1.39 N Y
6 CD2 CD1 C C doub 1.38 N Y
7 CD6 CD1 C C sing 1.39 N Y
8 CD6 CC4 C C sing 1.48 N N
9 CC4 NC3 C N sing 1.34 N Y
10 CC4 CC5 C C doub 1.39 N Y
11 NC3 CC2 N C doub 1.31 N Y
12 CB3 CB2 C C doub 1.38 N Y
13 CB3 CB4 C C sing 1.4 N Y
14 CA1 CA2 C C doub 1.38 N Y
15 CA1 CA6 C C sing 1.4 N Y
16 CB2 NB1 C N sing 1.32 N Y
17 CC5 CB4 C C sing 1.47 N N
18 CC5 NC1 C N sing 1.38 N Y
19 CA2 CA3 C C sing 1.38 N Y
20 CC2 CA6 C C sing 1.48 N N
21 CC2 NC1 C N sing 1.36 N Y
22 CB4 CB5 C C doub 1.4 N Y
23 CA6 CA5 C C doub 1.4 N Y
24 O2 S1 O S doub 1.42 N N
25 NB1 CB6 N C doub 1.32 N Y
26 CA3 S1 C S sing 1.76 N N
27 CA3 CA4 C C doub 1.38 N Y
28 CB5 CB6 C C sing 1.38 N Y
29 CA5 CA4 C C sing 1.38 N Y
30 S1 C1 S C sing 1.81 N N
31 C1 H2 C H sing 1.09 N N
32 C1 H3 C H sing 1.09 N N
33 C1 H4 C H sing 1.09 N N
34 CA1 H5 C H sing 1.08 N N
35 CA2 H6 C H sing 1.08 N N
36 CA4 H7 C H sing 1.08 N N
37 CA5 H8 C H sing 1.08 N N
38 CB2 H9 C H sing 1.08 N N
39 CB3 H10 C H sing 1.08 N N
40 CB5 H11 C H sing 1.08 N N
41 CB6 H12 C H sing 1.08 N N
42 NC1 H13 N H sing 0.97 N N
43 CD1 H15 C H sing 1.08 N N
44 CD2 H16 C H sing 1.08 N N
45 CD4 H17 C H sing 1.08 N N
46 CD5 H18 C H sing 1.08 N N