Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : JPW

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 -3.22 0.574 0.071
2 C5 C C2 N N N 0 -4.338 1.138 -0.81
3 C6 C C3 N N N 0 -5.695 0.813 -0.183
4 C11 C C4 N N N 0 5.557 -0.392 0.075
5 C7 C C5 N N N 0 -5.853 -0.705 -0.068
6 C8 C C6 N N N 0 -4.736 -1.269 0.813
7 C9 C C7 N N N 0 -3.379 -0.943 0.186
8 C10 C C8 N N N 0 3.317 -0.592 -0.615
9 C12 C C9 N N N 0 5.241 0.754 0.999
10 C13 C C10 N N N 0 3.796 0.622 1.489
11 N1 N N1 N N N 0 1.495 0.309 0.711
12 N2 N N2 N N N 0 -7.156 -1.017 0.535
13 C3 C C11 N N N 0 -1.863 0.9 -0.557
14 N3 N N3 N N N 0 4.601 -0.978 -0.661
15 C1 C C12 S N N 0 2.872 0.543 0.269
16 C2 C C13 N N N 0 0.463 0.684 -0.07
17 O1 O O1 N N N 0 -0.802 0.469 0.336
18 O2 O O2 N N N 0 0.675 1.217 -1.142
19 O3 O O3 N N N 0 2.498 -1.169 -1.298
20 O4 O O4 N N N 0 6.699 -0.791 -0.008
21 H1 H H1 N N N 0 -3.279 1.022 1.063
22 H2 H H2 N N N 0 -4.225 2.219 -0.892
23 H3 H H3 N N N 0 -4.279 0.691 -1.802
24 H4 H H4 N N N 0 -5.753 1.26 0.81
25 H5 H H5 N N N 0 -6.49 1.214 -0.81
26 H6 H H6 N N N 0 -5.794 -1.152 -1.06
27 H7 H H7 N N N 0 -4.794 -0.821 1.805
28 H8 H H8 N N N 0 -4.848 -2.35 0.895
29 H9 H H9 N N N 0 -3.32 -1.391 -0.807
30 H10 H H10 N N N 0 -2.583 -1.345 0.813
31 H11 H H11 N N N 0 5.919 0.732 1.852
32 H12 H H12 N N N 0 5.36 1.697 0.463
33 H13 H H13 N N N 0 3.693 -0.284 2.085
34 H14 H H14 N N N 0 3.532 1.492 2.091
35 H15 H H15 N N N 0 1.326 -0.116 1.566
36 H16 H H16 N N N 0 -7.284 -2.014 0.621
37 H17 H H17 N N N 0 -7.26 -0.56 1.428
38 H19 H H19 N N N 0 -1.77 0.379 -1.51
39 H20 H H20 N N N 0 -1.787 1.974 -0.72
40 H21 H H21 N N N 0 4.847 -1.708 -1.25
41 H22 H H22 N N N 0 2.923 1.479 -0.288