Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JPW    

Bonds between two atoms of the molecule

Total Number of Bonds: 42


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O4 C11 O C doub 1.21 N N
2 C11 C12 C C sing 1.51 N N
3 C11 N3 C N sing 1.34 N N
4 C12 C13 C C sing 1.53 N N
5 N3 C10 N C sing 1.34 N N
6 C13 C1 C C sing 1.53 N N
7 C10 C1 C C sing 1.51 N N
8 C10 O3 C O doub 1.21 N N
9 C1 N1 C N sing 1.47 N N
10 N1 C2 N C sing 1.35 N N
11 O2 C2 O C doub 1.22 N N
12 C2 O1 C O sing 1.35 N N
13 O1 C3 O C sing 1.45 N N
14 C3 C4 C C sing 1.53 N N
15 C9 C4 C C sing 1.53 N N
16 C9 C8 C C sing 1.53 N N
17 C4 C5 C C sing 1.53 N N
18 C8 C7 C C sing 1.53 N N
19 C5 C6 C C sing 1.53 N N
20 N2 C7 N C sing 1.47 N N
21 C7 C6 C C sing 1.53 N N
22 C4 H1 C H sing 1.09 N N
23 C5 H2 C H sing 1.09 N N
24 C5 H3 C H sing 1.09 N N
25 C6 H4 C H sing 1.09 N N
26 C6 H5 C H sing 1.09 N N
27 C7 H6 C H sing 1.09 N N
28 C8 H7 C H sing 1.09 N N
29 C8 H8 C H sing 1.09 N N
30 C9 H9 C H sing 1.09 N N
31 C9 H10 C H sing 1.09 N N
32 C12 H11 C H sing 1.09 N N
33 C12 H12 C H sing 1.09 N N
34 C13 H13 C H sing 1.09 N N
35 C13 H14 C H sing 1.09 N N
36 N1 H15 N H sing 0.97 N N
37 N2 H16 N H sing 1.01 N N
38 N2 H17 N H sing 1.01 N N
39 C3 H19 C H sing 1.09 N N
40 C3 H20 C H sing 1.09 N N
41 N3 H21 N H sing 0.97 N N
42 C1 H22 C H sing 1.09 N N