Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : KVE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 0.875 -0.221 0.312
2 C3 C C2 N Y N 0 -1.081 -1.012 1.584
3 C4 C C3 N Y N 0 -1.347 -0.345 0.442
4 C6 C C4 N Y N 0 -2.726 -0.088 -0.04
5 C10 C C5 N Y N 0 -4.177 0.766 -1.755
6 C14 C C6 N Y N 0 -7.665 0.297 -0.667
7 C7 C C7 N Y N 0 -3.805 -0.451 0.744
8 C8 C C8 N Y N 0 -5.108 -0.206 0.282
9 C12 C C9 N Y N 0 -6.23 -0.561 1.051
10 C13 C C10 N Y N 0 -7.48 -0.308 0.574
11 C15 C C11 N Y N 0 -6.602 0.647 -1.442
12 C9 C C12 N Y N 0 -5.296 0.41 -0.981
13 C11 C C13 N Y N 0 -2.924 0.527 -1.287
14 N5 N N1 N Y N 0 -0.268 0.062 -0.21
15 S2 S S1 N Y N 0 0.669 -1.086 1.771
16 C1' C C14 R N N 0 2.208 0.152 -0.285
17 O5' O O1 N N N 0 3.089 -0.972 -0.223
18 C5' C C15 R N N 0 4.379 -0.733 -0.788
19 C6' C C16 N N N 0 5.222 -2.006 -0.692
20 O6' O O2 N N N 0 4.637 -3.027 -1.503
21 C4' C C17 S N N 0 5.071 0.396 -0.02
22 O4' O O3 N N N 0 6.338 0.675 -0.619
23 C3' C C18 S N N 0 4.192 1.65 -0.071
24 O3' O O4 N N N 0 4.795 2.688 0.706
25 C2' C C19 R N N 0 2.812 1.317 0.504
26 O2' O O5 N N N 0 1.961 2.459 0.395
27 H1 H H1 N N N 0 -1.812 -1.427 2.262
28 H2 H H2 N N N 0 -4.313 1.236 -2.718
29 H3 H H3 N N N 0 -8.667 0.486 -1.022
30 H4 H H4 N N N 0 -3.647 -0.92 1.704
31 H5 H H5 N N N 0 -6.102 -1.031 2.015
32 H6 H H6 N N N 0 -8.341 -0.582 1.166
33 H7 H H7 N N N 0 -6.761 1.11 -2.405
34 H8 H H8 N N N 0 -2.07 0.808 -1.885
35 H9 H H9 N N N 0 2.07 0.449 -1.324
36 H10 H H10 N N N 0 4.27 -0.447 -1.835
37 H11 H H11 N N N 0 6.234 -1.8 -1.041
38 H12 H H12 N N N 0 5.257 -2.341 0.345
39 H13 H H13 N N N 0 5.12 -3.865 -1.49
40 H14 H H14 N N N 0 5.216 0.095 1.017
41 H15 H H15 N N N 0 6.832 1.382 -0.182
42 H16 H H16 N N N 0 4.087 1.98 -1.104
43 H17 H H17 N N N 0 4.291 3.513 0.718
44 H18 H H18 N N N 0 2.912 1.034 1.552
45 H19 H H19 N N N 0 1.069 2.319 0.74