Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : KVE    

Bonds between two atoms of the molecule

Total Number of Bonds: 48


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3' C3' O C sing 1.43 N N
2 O4' C4' O C sing 1.43 N N
3 C3' C4' C C sing 1.53 N N
4 C3' C2' C C sing 1.53 N N
5 C4' C5' C C sing 1.53 N N
6 O2' C2' O C sing 1.43 N N
7 C2' C1' C C sing 1.53 N N
8 O6' C6' O C sing 1.43 N N
9 C5' C6' C C sing 1.53 N N
10 C5' O5' C O sing 1.43 N N
11 C1' O5' C O sing 1.43 N N
12 C1' C1 C C sing 1.51 N N
13 S2 C1 S C sing 1.71 N Y
14 S2 C3 S C sing 1.76 N Y
15 C1 N5 C N doub 1.29 N Y
16 C3 C4 C C doub 1.35 N Y
17 N5 C4 N C sing 1.32 N Y
18 C4 C6 C C sing 1.48 N N
19 C6 C7 C C doub 1.38 N Y
20 C6 C11 C C sing 1.4 N Y
21 C7 C8 C C sing 1.4 N Y
22 C11 C10 C C doub 1.36 N Y
23 C8 C12 C C doub 1.41 N Y
24 C8 C9 C C sing 1.42 N Y
25 C12 C13 C C sing 1.36 N Y
26 C10 C9 C C sing 1.41 N Y
27 C9 C15 C C doub 1.41 N Y
28 C13 C14 C C doub 1.39 N Y
29 C15 C14 C C sing 1.36 N Y
30 C3 H1 C H sing 1.08 N N
31 C10 H2 C H sing 1.08 N N
32 C14 H3 C H sing 1.08 N N
33 C7 H4 C H sing 1.08 N N
34 C12 H5 C H sing 1.08 N N
35 C13 H6 C H sing 1.08 N N
36 C15 H7 C H sing 1.08 N N
37 C11 H8 C H sing 1.08 N N
38 C1' H9 C H sing 1.09 N N
39 C5' H10 C H sing 1.09 N N
40 C6' H11 C H sing 1.09 N N
41 C6' H12 C H sing 1.09 N N
42 O6' H13 O H sing 0.97 N N
43 C4' H14 C H sing 1.09 N N
44 O4' H15 O H sing 0.97 N N
45 C3' H16 C H sing 1.09 N N
46 O3' H17 O H sing 0.97 N N
47 C2' H18 C H sing 1.09 N N
48 O2' H19 O H sing 0.97 N N