Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : O3P

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 44


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C12 C C1 N N N 0 -4.505 -2.003 -0.044
2 C13 C C2 N N N 0 -4.246 0.915 0.178
3 C14 C C3 N Y N 0 -0.487 -0.866 1.01
4 C15 C C4 N Y N 0 0.131 -2.084 1.212
5 C3 C C8 N Y N 0 2.265 -1.09 0.735
6 C16 C C5 N Y N 0 1.501 -2.2 1.076
7 C8 C C6 N Y N 0 -1.793 3.12 -0.308
8 C1 C C7 N N N 0 5.744 -0.688 -0.546
9 C4 C C9 N Y N 0 1.652 0.137 0.53
10 C5 C C10 N Y N 0 0.271 0.252 0.668
11 C6 C C11 N Y N 0 -0.392 1.561 0.444
12 C7 C C12 N Y N 0 -0.036 2.752 0.996
13 N1 N N1 N Y N 0 -0.895 3.703 0.536
14 C10 C C13 N N N 0 -2.261 0.782 -1.203
15 C11 C C14 N N N 0 -3.753 -1.119 -1.04
16 N2 N N2 N N N 0 -3.184 0.038 -0.336
17 C9 C C15 N Y N 0 -1.516 1.805 -0.385
18 O O O1 N N N 0 3.698 0.331 -1.0
19 C C C16 N N N 0 4.302 -0.487 -0.334
20 N N N3 N N N 0 3.652 -1.21 0.599
21 N3 N N4 N N N 0 -5.073 -3.16 -0.748
22 H1 H H1 N N N 0 -3.817 -2.349 0.727
23 H2 H H2 N N N 0 -5.308 -1.429 0.418
24 H3 H H3 N N N 0 -4.809 1.331 -0.657
25 H4 H H4 N N N 0 -4.915 0.339 0.817
26 H5 H H5 N N N 0 -3.8 1.726 0.755
27 H6 H H6 N N N 0 -1.559 -0.781 1.113
28 H7 H H7 N N N 0 -0.459 -2.95 1.477
29 H8 H H8 N N N 0 1.98 -3.154 1.236
30 H9 H H9 N N N 0 -2.595 3.627 -0.825
31 H10 H H10 N N N 0 6.281 -1.414 0.046
32 H13 H H13 N N N 0 2.243 1.001 0.265
33 H14 H H14 N N N 0 0.784 2.915 1.679
34 H15 H H15 N N N 0 -0.872 4.644 0.771
35 H16 H H16 N N N 0 -1.55 0.09 -1.655
36 H17 H H17 N N N 0 -2.826 1.285 -1.988
37 H18 H H18 N N N 0 -2.95 -1.693 -1.501
38 H19 H H19 N N N 0 -4.441 -0.773 -1.811
39 H21 H H21 N N N 0 4.145 -1.814 1.176
40 H22 H H22 N N N 0 -4.356 -3.673 -1.238
41 H23 H H23 N N N 0 -5.576 -3.76 -0.111
42 C2 C C17 N N N 0 6.386 0.026 -1.467
43 H11 H H11 N N N 0 7.445 -0.121 -1.622
44 H12 H H12 N N N 0 5.849 0.752 -2.059