Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : O3P    

Bonds between two atoms of the molecule

Total Number of Bonds: 45


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C C C sing 1.47 N N
2 O C O C doub 1.22 N N
3 C N C N sing 1.35 N N
4 N C3 N C sing 1.4 N N
5 C16 C3 C C doub 1.39 N Y
6 C16 C15 C C sing 1.38 N Y
7 C3 C4 C C sing 1.39 N Y
8 C15 C14 C C doub 1.38 N Y
9 C4 C5 C C doub 1.39 N Y
10 C14 C5 C C sing 1.39 N Y
11 C5 C6 C C sing 1.48 N N
12 C6 C7 C C doub 1.36 N Y
13 C6 C9 C C sing 1.42 N Y
14 C7 N1 C N sing 1.36 N Y
15 C9 C10 C C sing 1.51 N N
16 C9 C8 C C doub 1.35 N Y
17 C10 N2 C N sing 1.47 N N
18 N1 C8 N C sing 1.36 N Y
19 C12 N3 C N sing 1.47 N N
20 C12 C11 C C sing 1.53 N N
21 C13 N2 C N sing 1.47 N N
22 N2 C11 N C sing 1.47 N N
23 C12 H1 C H sing 1.09 N N
24 C12 H2 C H sing 1.09 N N
25 C13 H3 C H sing 1.09 N N
26 C13 H4 C H sing 1.09 N N
27 C13 H5 C H sing 1.09 N N
28 C14 H6 C H sing 1.08 N N
29 C15 H7 C H sing 1.08 N N
30 C16 H8 C H sing 1.08 N N
31 C8 H9 C H sing 1.08 N N
32 C1 H10 C H sing 1.08 N N
33 C4 H13 C H sing 1.08 N N
34 C7 H14 C H sing 1.08 N N
35 N1 H15 N H sing 0.97 N N
36 C10 H16 C H sing 1.09 N N
37 C10 H17 C H sing 1.09 N N
38 C11 H18 C H sing 1.09 N N
39 C11 H19 C H sing 1.09 N N
40 N H21 N H sing 0.97 N N
41 N3 H22 N H sing 1.01 N N
42 N3 H23 N H sing 1.01 N N
43 C1 C2 C C doub 1.33 N N
44 C2 H11 C H sing 1.08 N N
45 C2 H12 C H sing 1.08 N N