Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : SJ2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 2.325 -0.037 -1.657
2 C2 C C2 N N N 0 2.424 1.612 0.135
3 C3 C C3 N N N 0 2.84 2.641 -0.885
4 O4 O O1 N N N 0 2.306 1.926 1.3
5 O O O2 N N N 0 2.786 -2.477 -0.488
6 N N N1 N N N 0 2.182 0.343 -0.249
7 CA C C4 S N N 0 1.777 -0.658 0.742
8 C C C5 N N N 0 2.801 -1.794 0.767
9 CB C C6 N N N 0 0.403 -1.218 0.37
10 CG C C7 N N N 0 -0.644 -0.106 0.465
11 CD C C8 N N N 0 -2.018 -0.666 0.093
12 NE N N2 N N N 0 -3.02 0.398 0.185
13 CZ C C9 N N N 0 -4.337 0.13 -0.106
14 NH1 N N3 N N N 0 -5.278 1.129 -0.02
15 NH2 N N4 N N N 0 -4.693 -1.072 -0.464
16 H1 H H1 N N N 0 3.346 -0.368 -1.842
17 H2 H H2 N N N 0 1.633 -0.847 -1.886
18 H3 H H3 N N N 0 2.101 0.822 -2.289
19 H4 H H4 N N N 0 2.062 2.738 -1.642
20 H5 H H5 N N N 0 2.989 3.601 -0.391
21 H6 H H6 N N N 0 3.77 2.327 -1.358
22 H7 H H7 N N N 0 3.412 -3.212 -0.543
23 H8 H H8 N N N 0 1.725 -0.193 1.727
24 H9 H H9 N N N 0 2.549 -2.493 1.565
25 H10 H H10 N N N 0 3.795 -1.383 0.945
26 H11 H H11 N N N 0 0.432 -1.603 -0.65
27 H12 H H12 N N N 0 0.141 -2.024 1.055
28 H13 H H13 N N N 0 -0.673 0.279 1.485
29 H14 H H14 N N N 0 -0.382 0.7 -0.22
30 H15 H H15 N N N 0 -1.989 -1.051 -0.927
31 H16 H H16 N N N 0 -2.28 -1.472 0.778
32 H17 H H17 N N N 0 -2.755 1.293 0.451
33 H18 H H18 N N N 0 -5.012 2.023 0.246
34 H19 H H19 N N N 0 -6.207 0.939 -0.225
35 H20 H H20 N N N 0 -5.622 -1.262 -0.669