Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : SJ2    

Bonds between two atoms of the molecule

Total Number of Bonds: 34


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 N C N sing 1.47 N N
2 O4 C2 O C doub 1.21 N N
3 C2 N C N sing 1.35 N N
4 C2 C3 C C sing 1.51 N N
5 N CA N C sing 1.47 N N
6 CA C C C sing 1.53 N N
7 CA CB C C sing 1.53 N N
8 C O C O sing 1.43 N N
9 CB CG C C sing 1.53 N N
10 CG CD C C sing 1.53 N N
11 CD NE C N sing 1.46 N N
12 NE CZ N C sing 1.38 N N
13 CZ NH2 C N doub 1.3 N N
14 CZ NH1 C N sing 1.38 N N
15 C1 H1 C H sing 1.09 N N
16 C1 H2 C H sing 1.09 N N
17 C1 H3 C H sing 1.09 N N
18 C3 H4 C H sing 1.09 N N
19 C3 H5 C H sing 1.09 N N
20 C3 H6 C H sing 1.09 N N
21 O H7 O H sing 0.97 N N
22 CA H8 C H sing 1.09 N N
23 C H9 C H sing 1.09 N N
24 C H10 C H sing 1.09 N N
25 CB H11 C H sing 1.09 N N
26 CB H12 C H sing 1.09 N N
27 CG H13 C H sing 1.09 N N
28 CG H14 C H sing 1.09 N N
29 CD H15 C H sing 1.09 N N
30 CD H16 C H sing 1.09 N N
31 NE H17 N H sing 0.97 N N
32 NH1 H18 N H sing 0.97 N N
33 NH1 H19 N H sing 0.97 N N
34 NH2 H20 N H sing 0.97 N N