Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : TAE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -3.459 -0.804 0.369
2 C2 C C2 N N N 0 -4.331 -0.999 -0.637
3 O2 O O2 N N N 0 -4.396 -2.089 -1.171
4 N3 N N3 N N N 0 -5.133 -0.005 -1.06
5 C4 C C4 N N N 0 -5.075 1.21 -0.477
6 O4 O O4 N N N 0 -5.8 2.111 -0.859
7 C5 C C5 N N N 0 -4.161 1.429 0.582
8 C6 C C6 N N N 0 -3.368 0.414 0.986
9 PA P PA N N N 0 2.117 -0.395 0.366
10 PB P PB N N N 0 4.847 0.498 -0.365
11 C1' C C1' N N N 0 -2.603 -1.907 0.811
12 O1A O O1A N N N 0 2.321 -0.419 1.832
13 O1B O O1B N N N 0 6.092 -0.294 -1.009
14 C2' C C2' N N N 0 -1.317 -1.891 0.026
15 O2A O O2A N N N 0 1.349 0.959 -0.047
16 O2B O O2B N N N 0 4.551 1.825 -1.228
17 C3' C C3' N N N 0 -0.167 -1.852 0.653
18 O3A O O3A N N N 0 3.546 -0.449 -0.375
19 O3B O O3B N N N 0 5.171 0.878 1.028
20 C4' C C4' N N N 0 1.119 -1.837 -0.132
21 C5M C C5M N N N 0 -4.076 2.777 1.25
22 HN3 H HN3 N N N 0 -5.756 -0.162 -1.787
23 H6 H H6 N N N 0 -2.666 0.562 1.793
24 H1' H H1' N N N 0 -2.382 -1.793 1.873
25 H1'A H H1'A N N N 0 -3.117 -2.854 0.647
26 HO1B H HO1B N N N 0 6.912 0.218 -1.036
27 H2' H H2' N N N 0 -1.343 -1.912 -1.053
28 HO2A H HO2A N N N 0 1.182 1.042 -0.995
29 HO2B H HO2B N N N 0 4.332 1.652 -2.154
30 H3' H H3' N N N 0 -0.141 -1.832 1.732
31 H4' H H4' N N N 0 0.894 -1.772 -1.197
32 H4'A H H4'A N N N 0 1.677 -2.751 0.066
33 H5M H H5M N N N 0 -4.789 3.459 0.786
34 H5MA H H5MA N N N 0 -4.308 2.674 2.309
35 H5MB H H5MB N N N 0 -3.067 3.175 1.136