Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
1G5
Bonds between two atoms of the molecule
Total Number of Bonds: 81
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C35
C23
C
C
sing
1.53
N
N
2
C35
S36
C
S
sing
1.81
N
N
3
C23
C21
C
C
sing
1.53
N
N
4
O37
S36
O
S
doub
1.42
N
N
5
C22
C21
C
C
sing
1.53
N
N
6
C22
C24
C
C
sing
1.51
N
N
7
S36
C39
S
C
sing
1.81
N
N
8
S36
O38
S
O
doub
1.42
N
N
9
C25
C24
C
C
doub
1.38
N
Y
10
C25
C26
C
C
sing
1.38
N
Y
11
C21
N20
C
N
sing
1.47
N
N
12
C24
C29
C
C
sing
1.38
N
Y
13
C26
C27
C
C
doub
1.38
N
Y
14
C29
C28
C
C
doub
1.38
N
Y
15
N20
C19
N
C
sing
1.35
N
N
16
C27
C28
C
C
sing
1.38
N
Y
17
C27
C30
C
C
sing
1.51
N
N
18
N31
C30
N
C
sing
1.47
N
N
19
C19
O33
C
O
doub
1.21
N
N
20
C19
C18
C
C
sing
1.51
N
N
21
C18
C40
C
C
sing
1.53
N
N
22
C18
N17
C
N
sing
1.46
N
N
23
C40
O41
C
O
sing
1.43
N
N
24
N17
C15
N
C
sing
1.35
N
N
25
C14
C12
C
C
sing
1.53
N
N
26
C15
O16
C
O
doub
1.21
N
N
27
C15
C11
C
C
sing
1.51
N
N
28
C12
C11
C
C
sing
1.53
N
N
29
C12
C13
C
C
sing
1.53
N
N
30
C11
N10
C
N
sing
1.47
N
N
31
N10
C9
N
C
sing
1.35
N
N
32
O32
C9
O
C
doub
1.22
N
N
33
C9
C4
C
C
sing
1.48
N
N
34
C5
C4
C
C
doub
1.4
N
Y
35
C5
C6
C
C
sing
1.38
N
Y
36
C4
C3
C
C
sing
1.4
N
Y
37
C6
C1
C
C
doub
1.38
N
Y
38
C3
C7
C
C
sing
1.51
N
N
39
C3
C2
C
C
doub
1.38
N
Y
40
C1
C2
C
C
sing
1.39
N
Y
41
C2
O8
C
O
sing
1.36
N
N
42
C7
H1
C
H
sing
1.09
N
N
43
C7
H2
C
H
sing
1.09
N
N
44
C7
H3
C
H
sing
1.09
N
N
45
O8
H4
O
H
sing
0.97
N
N
46
C1
H5
C
H
sing
1.08
N
N
47
C6
H6
C
H
sing
1.08
N
N
48
C5
H7
C
H
sing
1.08
N
N
49
N10
H8
N
H
sing
0.97
N
N
50
C11
H9
C
H
sing
1.09
N
N
51
C12
H10
C
H
sing
1.09
N
N
52
C13
H11
C
H
sing
1.09
N
N
53
C13
H12
C
H
sing
1.09
N
N
54
C13
H13
C
H
sing
1.09
N
N
55
C14
H14
C
H
sing
1.09
N
N
56
C14
H15
C
H
sing
1.09
N
N
57
C14
H16
C
H
sing
1.09
N
N
58
N17
H17
N
H
sing
0.97
N
N
59
C18
H18
C
H
sing
1.09
N
N
60
C40
H19
C
H
sing
1.09
N
N
61
C40
H20
C
H
sing
1.09
N
N
62
O41
H21
O
H
sing
0.97
N
N
63
N20
H22
N
H
sing
0.97
N
N
64
C21
H23
C
H
sing
1.09
N
N
65
C23
H24
C
H
sing
1.09
N
N
66
C23
H25
C
H
sing
1.09
N
N
67
C35
H26
C
H
sing
1.09
N
N
68
C35
H27
C
H
sing
1.09
N
N
69
C39
H28
C
H
sing
1.09
N
N
70
C39
H29
C
H
sing
1.09
N
N
71
C39
H30
C
H
sing
1.09
N
N
72
C22
H31
C
H
sing
1.09
N
N
73
C22
H32
C
H
sing
1.09
N
N
74
C25
H33
C
H
sing
1.08
N
N
75
C26
H34
C
H
sing
1.08
N
N
76
C30
H35
C
H
sing
1.09
N
N
77
C30
H36
C
H
sing
1.09
N
N
78
N31
H37
N
H
sing
1.01
N
N
79
N31
H38
N
H
sing
1.01
N
N
80
C28
H40
C
H
sing
1.08
N
N
81
C29
H41
C
H
sing
1.08
N
N