Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 1PV    

Bonds between two atoms of the molecule

Total Number of Bonds: 68


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 N2 C N sing 1.47 N N
2 N2 C3 N C sing 1.35 N N
3 O18 B17 O B sing 1.42 N N
4 O4 C3 O C doub 1.22 N N
5 C3 C5 C C sing 1.47 N N
6 B17 O19 B O sing 1.42 N N
7 B17 C16 B C sing 1.57 N N
8 C32 C31 C C sing 1.53 N N
9 C32 C30 C C sing 1.53 N N
10 C31 C30 C C sing 1.53 N N
11 C15 C16 C C doub 1.39 N Y
12 C15 C14 C C sing 1.38 N Y
13 C5 C29 C C sing 1.48 N Y
14 C5 C6 C C doub 1.38 N Y
15 C16 C20 C C sing 1.4 N Y
16 C39 C38 C C doub 1.38 N Y
17 C39 C33 C C sing 1.4 N Y
18 C28 C29 C C doub 1.39 N Y
19 C28 C27 C C sing 1.38 N Y
20 C38 C36 C C sing 1.39 N Y
21 C29 C8 C C sing 1.4 N Y
22 C30 C27 C C sing 1.51 N N
23 C33 C6 C C sing 1.47 N N
24 C33 C34 C C doub 1.4 N Y
25 C6 O7 C O sing 1.34 N Y
26 C36 F37 C F sing 1.35 N N
27 C36 C35 C C doub 1.39 N Y
28 C14 C13 C C doub 1.38 N Y
29 C27 C10 C C doub 1.39 N Y
30 C20 F21 C F sing 1.35 N N
31 C20 C22 C C doub 1.38 N Y
32 C34 C35 C C sing 1.38 N Y
33 C8 O7 C O sing 1.35 N Y
34 C8 C9 C C doub 1.39 N Y
35 C13 C22 C C sing 1.38 N Y
36 C13 C12 C C sing 1.51 N N
37 C10 C9 C C sing 1.39 N Y
38 C10 N11 C N sing 1.4 N N
39 N11 C12 N C sing 1.47 N N
40 N11 S23 N S sing 1.66 N N
41 O25 S23 O S doub 1.42 N N
42 S23 C24 S C sing 1.81 N N
43 S23 O26 S O doub 1.42 N N
44 C1 H1 C H sing 1.09 N N
45 C1 H2 C H sing 1.09 N N
46 C1 H3 C H sing 1.09 N N
47 C9 H4 C H sing 1.08 N N
48 C15 H5 C H sing 1.08 N N
49 O19 H6 O H sing 0.97 N N
50 C22 H7 C H sing 1.08 N N
51 C24 H8 C H sing 1.09 N N
52 C24 H9 C H sing 1.09 N N
53 C24 H10 C H sing 1.09 N N
54 C28 H11 C H sing 1.08 N N
55 C30 H12 C H sing 1.09 N N
56 C31 H13 C H sing 1.09 N N
57 C31 H14 C H sing 1.09 N N
58 C32 H15 C H sing 1.09 N N
59 C32 H16 C H sing 1.09 N N
60 C34 H17 C H sing 1.08 N N
61 C35 H18 C H sing 1.08 N N
62 C38 H19 C H sing 1.08 N N
63 C39 H20 C H sing 1.08 N N
64 N2 H21 N H sing 0.97 N N
65 C12 H22 C H sing 1.09 N N
66 C12 H23 C H sing 1.09 N N
67 O18 H24 O H sing 0.97 N N
68 C14 H25 C H sing 1.08 N N