Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 1VT    

Bonds between two atoms of the molecule

Total Number of Bonds: 64


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C17 C16 C C doub 1.38 N Y
2 C17 C12 C C sing 1.38 N Y
3 O C10 O C doub 1.21 N N
4 C16 C15 C C sing 1.38 N Y
5 S C18 S C sing 1.75 N Y
6 S C09 S C sing 1.7 N Y
7 C25 C12 C C sing 1.51 N N
8 C25 N23 C N sing 1.47 N N
9 C12 C13 C C doub 1.38 N Y
10 C18 C19 C C doub 1.34 N Y
11 C15 C14 C C doub 1.38 N Y
12 C10 C11 C C sing 1.51 N N
13 C10 N C N sing 1.35 N N
14 C11 C2 C C sing 1.53 N N
15 C2 N23 C N sing 1.47 N N
16 C13 C14 C C sing 1.38 N Y
17 C09 N C N sing 1.39 N N
18 C09 C01 C C doub 1.37 N Y
19 C19 C01 C C sing 1.45 N Y
20 C19 C20 C C sing 1.48 N N
21 C01 C02 C C sing 1.46 N N
22 C20 C21 C C doub 1.39 N Y
23 C20 C C C sing 1.39 N Y
24 C21 C22 C C sing 1.38 N Y
25 C C24 C C doub 1.38 N Y
26 C22 C23 C C doub 1.38 N Y
27 C24 C23 C C sing 1.38 N Y
28 N01 C02 N C sing 1.35 N N
29 N01 C1 N C sing 1.46 N N
30 C02 O01 C O doub 1.22 N N
31 C1 C03 C C sing 1.51 N N
32 C08 C03 C C doub 1.38 N Y
33 C08 C07 C C sing 1.38 N Y
34 C03 C04 C C sing 1.38 N Y
35 C07 C06 C C doub 1.38 N Y
36 C04 C05 C C doub 1.38 N Y
37 C06 C05 C C sing 1.38 N Y
38 N01 H1 N H sing 0.97 N N
39 C1 H2 C H sing 1.09 N N
40 C1 H3 C H sing 1.09 N N
41 C04 H4 C H sing 1.08 N N
42 C05 H5 C H sing 1.08 N N
43 C06 H6 C H sing 1.08 N N
44 C07 H7 C H sing 1.08 N N
45 C08 H8 C H sing 1.08 N N
46 N H9 N H sing 0.97 N N
47 C11 H10 C H sing 1.09 N N
48 C11 H11 C H sing 1.09 N N
49 C2 H12 C H sing 1.09 N N
50 C2 H13 C H sing 1.09 N N
51 N23 H14 N H sing 1.01 N N
52 C25 H16 C H sing 1.09 N N
53 C25 H17 C H sing 1.09 N N
54 C13 H18 C H sing 1.08 N N
55 C14 H19 C H sing 1.08 N N
56 C15 H20 C H sing 1.08 N N
57 C16 H21 C H sing 1.08 N N
58 C17 H22 C H sing 1.08 N N
59 C18 H23 C H sing 1.08 N N
60 C21 H24 C H sing 1.08 N N
61 C22 H25 C H sing 1.08 N N
62 C23 H26 C H sing 1.08 N N
63 C24 H27 C H sing 1.08 N N
64 C H28 C H sing 1.08 N N