Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 21V    

Bonds between two atoms of the molecule

Total Number of Bonds: 59


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 NA2 C2 N C sing 1.37 N N
2 N3 C2 N C doub 1.31 N N
3 N3 C4 N C sing 1.34 N N
4 O4 C4 O C doub 1.22 N N
5 C2 N1 C N sing 1.36 N N
6 C4 C4A C C sing 1.41 N N
7 N1 C8A N C sing 1.37 N N
8 C4A C8A C C doub 1.36 N N
9 C4A C5 C C sing 1.5 N N
10 C8A N8 C N sing 1.38 N N
11 C5 C6 C C sing 1.53 N N
12 N8 C7 N C sing 1.47 N N
13 OE1 CD O C doub 1.21 N N
14 OE2 CD O C sing 1.34 N N
15 CD CG C C sing 1.51 N N
16 C6 C7 C C sing 1.53 N N
17 C6 C9 C C sing 1.53 N N
18 C9 C10 C C sing 1.53 N N
19 CG CB C C sing 1.53 N N
20 C13 C12 C C doub 1.38 N Y
21 C13 C14 C C sing 1.38 N Y
22 CB CA C C sing 1.53 N N
23 C12 C11 C C sing 1.4 N Y
24 C10 C14 C C sing 1.51 N N
25 C14 C15 C C doub 1.38 N Y
26 C11 C C C sing 1.48 N N
27 C11 C16 C C doub 1.4 N Y
28 C O C O doub 1.22 N N
29 C N C N sing 1.35 N N
30 C15 C16 C C sing 1.38 N Y
31 N CA N C sing 1.46 N N
32 CA CT C C sing 1.51 N N
33 O1 CT O C doub 1.21 N N
34 CT O2 C O sing 1.34 N N
35 OE2 H1 O H sing 0.97 N N
36 CG H2 C H sing 1.09 N N
37 CG H3 C H sing 1.09 N N
38 CB H4 C H sing 1.09 N N
39 CB H5 C H sing 1.09 N N
40 CA H6 C H sing 1.09 N N
41 O2 H7 O H sing 0.97 N N
42 N H8 N H sing 0.97 N N
43 C12 H9 C H sing 1.08 N N
44 C13 H10 C H sing 1.08 N N
45 C16 H11 C H sing 1.08 N N
46 C15 H12 C H sing 1.08 N N
47 C10 H13 C H sing 1.09 N N
48 C10 H14 C H sing 1.09 N N
49 C9 H15 C H sing 1.09 N N
50 C9 H16 C H sing 1.09 N N
51 C6 H17 C H sing 1.09 N N
52 C7 H18 C H sing 1.09 N N
53 C7 H19 C H sing 1.09 N N
54 C5 H20 C H sing 1.09 N N
55 C5 H21 C H sing 1.09 N N
56 NA2 H24 N H sing 0.97 N N
57 NA2 H25 N H sing 0.97 N N
58 N8 H26 N H sing 0.97 N N
59 N1 H22 N H sing 0.97 N N