Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 2D8    

Bonds between two atoms of the molecule

Total Number of Bonds: 25


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.53 N N
2 C2 N1 C N sing 1.47 N N
3 C2 P C P sing 1.82 N N
4 O62 C6 O C doub 1.21 N N
5 C4 P C P sing 1.82 N N
6 C4 C5 C C sing 1.53 N N
7 P O31 P O doub 1.48 N N
8 P O32 P O sing 1.61 N N
9 C6 C5 C C sing 1.51 N N
10 C6 O61 C O sing 1.34 N N
11 C7 C5 C C sing 1.53 N N
12 C4 H1 C H sing 1.09 N N
13 C4 H2 C H sing 1.09 N N
14 C5 H3 C H sing 1.09 N N
15 C7 H4 C H sing 1.09 N N
16 C7 H5 C H sing 1.09 N N
17 C7 H6 C H sing 1.09 N N
18 N1 H7 N H sing 1.01 N N
19 N1 H8 N H sing 1.01 N N
20 C1 H10 C H sing 1.09 N N
21 C1 H11 C H sing 1.09 N N
22 C1 H12 C H sing 1.09 N N
23 C2 H13 C H sing 1.09 N N
24 O32 H14 O H sing 0.97 N N
25 O61 H15 O H sing 0.97 N N