Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 38Z    

Bonds between two atoms of the molecule

Total Number of Bonds: 83


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C7 C6 C C sing 1.53 N N
2 C7 N1 C N sing 1.47 N N
3 C6 N2 C N sing 1.47 N N
4 C18 N C N sing 1.47 N N
5 C18 C19 C C sing 1.54 N N
6 C2 N C N sing 1.47 N N
7 C2 C3 C C sing 1.51 N N
8 N1 C3 N C sing 1.35 N N
9 N1 C4 N C sing 1.47 N N
10 N2 C8 N C sing 1.39 N N
11 N2 C5 N C sing 1.47 N N
12 N C1 N C sing 1.48 N N
13 C3 O C O doub 1.21 N N
14 O1 C20 O C doub 1.21 N N
15 C13 C8 C C doub 1.39 N Y
16 C13 C12 C C sing 1.38 N Y
17 C19 C20 C C sing 1.51 N N
18 C19 C C C sing 1.55 N N
19 C4 C5 C C sing 1.54 N N
20 C20 N5 C N sing 1.35 N N
21 C8 C9 C C sing 1.39 N Y
22 C12 C11 C C doub 1.4 N Y
23 C1 C C C sing 1.55 N N
24 N5 C21 N C sing 1.4 N N
25 C21 C22 C C sing 1.4 N Y
26 C21 C26 C C doub 1.36 N Y
27 C22 C23 C C doub 1.36 N Y
28 C9 C10 C C doub 1.38 N Y
29 C11 C10 C C sing 1.39 N Y
30 C11 C14 C C sing 1.48 N N
31 C26 C25 C C sing 1.41 N Y
32 C23 C24 C C sing 1.41 N Y
33 N3 C14 N C doub 1.33 N Y
34 N3 C15 N C sing 1.32 N Y
35 C24 C25 C C sing 1.47 N Y
36 C24 N8 C N doub 1.32 N Y
37 C25 C27 C C doub 1.4 N Y
38 C32 C31 C C doub 1.38 N Y
39 C32 C28 C C sing 1.4 N Y
40 C31 N6 C N sing 1.32 N Y
41 C14 N4 C N sing 1.33 N Y
42 N8 N7 N N sing 1.4 N Y
43 C27 C28 C C sing 1.47 N N
44 C27 N7 C N sing 1.35 N Y
45 C28 C29 C C doub 1.4 N Y
46 C15 C16 C C doub 1.39 N Y
47 N6 C30 N C doub 1.32 N Y
48 C29 C30 C C sing 1.38 N Y
49 N4 C17 N C doub 1.32 N Y
50 C16 C17 C C sing 1.39 N Y
51 N5 H1 N H sing 0.97 N N
52 C26 H2 C H sing 1.08 N N
53 C32 H3 C H sing 1.08 N N
54 C31 H4 C H sing 1.08 N N
55 C30 H5 C H sing 1.08 N N
56 C29 H6 C H sing 1.08 N N
57 N7 H7 N H sing 0.97 N N
58 C23 H8 C H sing 1.08 N N
59 C22 H9 C H sing 1.08 N N
60 C19 H10 C H sing 1.09 N N
61 C H11 C H sing 1.09 N N
62 C H12 C H sing 1.09 N N
63 C18 H13 C H sing 1.09 N N
64 C18 H14 C H sing 1.09 N N
65 C1 H16 C H sing 1.09 N N
66 C1 H17 C H sing 1.09 N N
67 C2 H18 C H sing 1.09 N N
68 C2 H19 C H sing 1.09 N N
69 C7 H20 C H sing 1.09 N N
70 C7 H21 C H sing 1.09 N N
71 C6 H22 C H sing 1.09 N N
72 C6 H23 C H sing 1.09 N N
73 C5 H24 C H sing 1.09 N N
74 C5 H25 C H sing 1.09 N N
75 C4 H26 C H sing 1.09 N N
76 C4 H27 C H sing 1.09 N N
77 C13 H28 C H sing 1.08 N N
78 C12 H29 C H sing 1.08 N N
79 C10 H30 C H sing 1.08 N N
80 C9 H31 C H sing 1.08 N N
81 C17 H32 C H sing 1.08 N N
82 C16 H33 C H sing 1.08 N N
83 C15 H34 C H sing 1.08 N N