Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 3ES    

Bonds between two atoms of the molecule

Total Number of Bonds: 93


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAQ CAK C C sing 1.38 N Y
2 CAQ CBP C C doub 1.38 N Y
3 CAK CAH C C doub 1.38 N Y
4 CAH CAL C C sing 1.38 N Y
5 CAL CAR C C doub 1.38 N Y
6 CAR CBP C C sing 1.38 N Y
7 CBP CBB C C sing 1.51 N N
8 CBB OBJ C O sing 1.45 N N
9 OBJ CBM O C sing 1.35 N N
10 CBM OAB C O doub 1.21 N N
11 CBM NBI C N sing 1.35 N N
12 NBI CBX N C sing 1.47 N N
13 CBX CBE C C sing 1.53 N N
14 CBX PBY C P sing 1.82 N N
15 CBE CBQ C C sing 1.51 N N
16 CBQ CAS C C sing 1.38 N Y
17 CBQ CAT C C doub 1.38 N Y
18 CAS CAM C C doub 1.38 N Y
19 CAM CAI C C sing 1.38 N Y
20 CAI CAN C C doub 1.38 N Y
21 CAN CAT C C sing 1.38 N Y
22 PBY OAG P O sing 1.61 N N
23 PBY OAD P O doub 1.48 N N
24 PBY CBF P C sing 1.82 N N
25 CBF CBV C C sing 1.53 N N
26 CBV CBN C C sing 1.51 N N
27 CBV CBC C C sing 1.53 N N
28 CBN OAC C O doub 1.21 N N
29 CBN N C N sing 1.35 N N
30 N CA N C sing 1.47 N N
31 CA C C C sing 1.51 N N
32 CA CB C C sing 1.53 N N
33 C OXT C O sing 1.34 N N
34 C O C O doub 1.21 N N
35 CB CG C C sing 1.51 N N
36 CG CD1 C C sing 1.38 N Y
37 CG CD2 C C doub 1.38 N Y
38 CD1 CE1 C C doub 1.38 N Y
39 CE1 CZ C C sing 1.39 N Y
40 CZ OH C O sing 1.36 N N
41 CZ CE2 C C doub 1.39 N Y
42 CE2 CD2 C C sing 1.38 N Y
43 CBC CBS C C sing 1.51 N N
44 CBS CBA C C doub 1.35 N Y
45 CBS OBK C O sing 1.34 N Y
46 CBA CBU C C sing 1.42 N Y
47 OBK NBG O N sing 1.21 N Y
48 NBG CBU N C doub 1.31 N Y
49 CBU CBT C C sing 1.48 N Y
50 CBT CAU C C sing 1.39 N Y
51 CBT CAV C C doub 1.39 N Y
52 CAU CAO C C doub 1.38 N Y
53 CAO CAJ C C sing 1.38 N Y
54 CAJ CAP C C doub 1.38 N Y
55 CAP CAV C C sing 1.38 N Y
56 CAQ HAQ C H sing 1.08 N N
57 CAK HAK C H sing 1.08 N N
58 CAH HAH C H sing 1.08 N N
59 CAL HAL C H sing 1.08 N N
60 CAR HAR C H sing 1.08 N N
61 CBB HBB1 C H sing 1.09 N N
62 CBB HBB2 C H sing 1.09 N N
63 NBI HBI N H sing 0.97 N N
64 CBX HBX C H sing 1.09 N N
65 CBE HBE1 C H sing 1.09 N N
66 CBE HBE2 C H sing 1.09 N N
67 CAS HAS C H sing 1.08 N N
68 CAT HAT C H sing 1.08 N N
69 CAM HAM C H sing 1.08 N N
70 CAI HAI C H sing 1.08 N N
71 CAN HAN C H sing 1.08 N N
72 OAG HAG O H sing 0.97 N N
73 CBF HBF1 C H sing 1.09 N N
74 CBF HBF2 C H sing 1.09 N N
75 CBV HBV C H sing 1.09 N N
76 CBC HBC1 C H sing 1.09 N N
77 CBC HBC2 C H sing 1.09 N N
78 N H N H sing 0.97 N N
79 CA HA C H sing 1.09 N N
80 CB HB1C C H sing 1.09 N N
81 CB HB2C C H sing 1.09 N N
82 OXT HXT O H sing 0.97 N N
83 CD1 HD1 C H sing 1.08 N N
84 CD2 HD2 C H sing 1.08 N N
85 CE1 HE1 C H sing 1.08 N N
86 OH HH O H sing 0.97 N N
87 CE2 HE2 C H sing 1.08 N N
88 CBA HBA C H sing 1.08 N N
89 CAU HAU C H sing 1.08 N N
90 CAV HAV C H sing 1.08 N N
91 CAO HAO C H sing 1.08 N N
92 CAJ HAJ C H sing 1.08 N N
93 CAP HAP C H sing 1.08 N N