Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 6CF    

Bonds between two atoms of the molecule

Total Number of Bonds: 47


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 N1 C N sing 1.35 N N
2 C1' N1 C N sing 1.47 N N
3 N1 C6 N C sing 1.36 N N
4 O5' P1 O P sing 1.61 N N
5 C3A P1 C P sing 1.82 N N
6 P1 O2A P O doub 1.48 N N
7 P1 O1A P O sing 1.61 N N
8 O2 C2 O C doub 1.22 N N
9 C2 N3 C N sing 1.33 N N
10 O1B P2 O P doub 1.48 N N
11 P2 O2B P O sing 1.61 N N
12 P2 C3A P C sing 1.82 N N
13 P2 O3B P O sing 1.61 N N
14 N3 C4 N C doub 1.33 N N
15 O3B P3 O P sing 1.61 N N
16 P3 O3G P O doub 1.48 N N
17 P3 O1G P O sing 1.61 N N
18 P3 O2G P O sing 1.61 N N
19 C4 N4 C N sing 1.38 N N
20 C4 C5 C C sing 1.41 N N
21 N4 HN4 N H sing 0.97 N N
22 N4 HN4A N H sing 0.97 N N
23 C6 C5 C C doub 1.35 N N
24 C5 H5 C H sing 1.08 N N
25 C6 H6 C H sing 1.08 N N
26 C2' C1' C C sing 1.55 N N
27 C1' O4' C O sing 1.44 N N
28 C1' H1' C H sing 1.09 N N
29 F1A C3A F C sing 1.4 N N
30 O1A HO1A O H sing 0.97 N N
31 O1G HO1G O H sing 0.97 N N
32 C2' C3' C C sing 1.54 N N
33 C2' H2' C H sing 1.09 N N
34 C2' H2'A C H sing 1.09 N N
35 C3A F2A C F sing 1.4 N N
36 O2B HO2B O H sing 0.97 N N
37 O2G HO2G O H sing 0.97 N N
38 O3' C3' O C sing 1.43 N N
39 C3' C4' C C sing 1.55 N N
40 C3' H3' C H sing 1.09 N N
41 O3' HO3' O H sing 0.97 N N
42 O4' C4' O C sing 1.44 N N
43 C4' C5' C C sing 1.53 N N
44 C4' H4' C H sing 1.09 N N
45 C5' O5' C O sing 1.43 N N
46 C5' H5' C H sing 1.09 N N
47 C5' H5'A C H sing 1.09 N N