Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : A1AKG    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O C O C doub 1.21 N N
2 O1 C O C sing 1.34 N N
3 C C1 C C sing 1.51 N N
4 C1 C2 C C sing 1.53 N N
5 C2 N C N sing 1.47 N N
6 N C3 N C sing 1.35 N N
7 C3 O2 C O doub 1.22 N N
8 C4 C3 C C sing 1.48 N N
9 C4 N1 C N doub 1.33 N Y
10 N1 C5 N C sing 1.32 N Y
11 C5 N2 C N doub 1.32 N Y
12 N2 C6 N C sing 1.33 N Y
13 C6 N3 C N sing 1.37 N Y
14 N3 C7 N C sing 1.37 N Y
15 C7 C8 C C doub 1.34 N Y
16 C8 C9 C C sing 1.46 N Y
17 C9 C4 C C sing 1.4 N Y
18 C6 C9 C C doub 1.42 N Y
19 C10 C2 C C sing 1.51 N N
20 C10 C11 C C doub 1.39 N Y
21 C11 C12 C C sing 1.38 N Y
22 C12 N4 C N doub 1.32 N Y
23 N4 C13 N C sing 1.32 N Y
24 C13 C14 C C doub 1.38 N Y
25 C14 C10 C C sing 1.39 N Y
26 N3 H1 N H sing 0.97 N N
27 C5 H6 C H sing 1.08 N N
28 C7 H7 C H sing 1.08 N N
29 C8 H8 C H sing 1.08 N N
30 C13 H11 C H sing 1.08 N N
31 N H5 N H sing 0.97 N N
32 C2 H C H sing 1.09 N N
33 C1 H3 C H sing 1.09 N N
34 C1 H4 C H sing 1.09 N N
35 O1 H2 O H sing 0.97 N N
36 C14 H12 C H sing 1.08 N N
37 C12 H10 C H sing 1.08 N N
38 C11 H9 C H sing 1.08 N N