Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ARX    

Bonds between two atoms of the molecule

Total Number of Bonds: 99


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C6 C5 C C doub 1.41 N Y
2 C5 C4 C C sing 1.4 N Y
3 C5 N7 C N sing 1.35 N Y
4 C75 O77 C O doub 1.21 N N
5 C32 C75 C C sing 1.51 N N
6 C75 N76 C N sing 1.35 N N
7 N76 HN76 N H sing 0.97 N N
8 N76 HN7A N H sing 0.97 N N
9 N31 C32 N C sing 1.47 N N
10 C78 C32 C C sing 1.53 N N
11 C32 H32 C H sing 1.09 N N
12 C79 C78 C C sing 1.53 N N
13 C78 H78 C H sing 1.09 N N
14 C78 H78A C H sing 1.09 N N
15 C85 C79 C C sing 1.53 N N
16 C79 H79 C H sing 1.09 N N
17 C79 H79A C H sing 1.09 N N
18 N77 C85 N C sing 1.47 N N
19 C85 H85 C H sing 1.09 N N
20 C85 H85A C H sing 1.09 N N
21 C86 N77 C N sing 1.37 N N
22 N77 HN77 N H sing 0.97 N N
23 N94 C86 N C doub 1.3 N N
24 C86 N93 C N sing 1.37 N N
25 N94 HN94 N H sing 0.97 N N
26 N93 HN93 N H sing 0.97 N N
27 N93 HN9A N H sing 0.97 N N
28 C30 N31 C N sing 1.35 N N
29 N31 HN31 N H sing 0.97 N N
30 C29 C30 C C sing 1.51 N N
31 C30 O35 C O doub 1.21 N N
32 N27 C29 N C sing 1.47 N N
33 C29 C37 C C sing 1.53 N N
34 C29 H29 C H sing 1.09 N N
35 C37 C38 C C sing 1.53 N N
36 C37 H37 C H sing 1.09 N N
37 C37 H37A C H sing 1.09 N N
38 C38 C39 C C sing 1.53 N N
39 C38 H38 C H sing 1.09 N N
40 C38 H38A C H sing 1.09 N N
41 C39 N40 C N sing 1.47 N N
42 C39 H39 C H sing 1.09 N N
43 C39 H39A C H sing 1.09 N N
44 N40 C41 N C sing 1.37 N N
45 N40 HN40 N H sing 0.97 N N
46 N42 C41 N C doub 1.3 N N
47 C41 N43 C N sing 1.38 N N
48 N42 HN42 N H sing 0.97 N N
49 N43 HN43 N H sing 0.97 N N
50 N43 HN4A N H sing 0.97 N N
51 C26 N27 C N sing 1.35 N N
52 N27 HN27 N H sing 0.97 N N
53 O28 C26 O C doub 1.21 N N
54 C25 C26 C C sing 1.51 N N
55 C24 C25 C C sing 1.53 N N
56 C25 H25 C H sing 1.09 N N
57 C25 H25A C H sing 1.09 N N
58 C24 C23 C C sing 1.53 N N
59 C24 H24 C H sing 1.09 N N
60 C24 H24A C H sing 1.09 N N
61 C23 C22 C C sing 1.53 N N
62 C23 H23 C H sing 1.09 N N
63 C23 H23A C H sing 1.09 N N
64 C22 C21 C C sing 1.53 N N
65 C22 H22 C H sing 1.09 N N
66 C22 H22A C H sing 1.09 N N
67 N20 C21 N C sing 1.47 N N
68 C21 H21 C H sing 1.09 N N
69 C21 H21A C H sing 1.09 N N
70 C5' N20 C N sing 1.35 N N
71 N20 HN20 N H sing 0.97 N N
72 O5' C5' O C doub 1.21 N N
73 C5' C4' C C sing 1.51 N N
74 O4' C4' O C sing 1.44 N N
75 C4' C3' C C sing 1.54 N N
76 C4' H4' C H sing 1.09 N N
77 O4' C1' O C sing 1.44 N N
78 N9 C1' N C sing 1.47 N N
79 C1' C2' C C sing 1.54 N N
80 C1' H1' C H sing 1.09 N N
81 C2' O2' C O sing 1.43 N N
82 C2' C3' C C sing 1.54 N N
83 C2' H2' C H sing 1.09 N N
84 O2' HO2' O H sing 0.97 N N
85 C3' O3' C O sing 1.43 N N
86 C3' H3' C H sing 1.09 N N
87 O3' HO3' O H sing 0.97 N N
88 C4 N9 C N sing 1.37 N Y
89 N9 C8 N C sing 1.36 N Y
90 N3 C4 N C doub 1.33 N Y
91 N7 C8 N C doub 1.3 N Y
92 C8 H8 C H sing 1.08 N N
93 C2 N3 C N sing 1.32 N Y
94 N1 C2 N C doub 1.32 N Y
95 C2 H2 C H sing 1.08 N N
96 N1 C6 N C sing 1.33 N Y
97 N6 C6 N C sing 1.38 N N
98 N6 HN6 N H sing 0.97 N N
99 N6 HN6A N H sing 0.97 N N