Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : F3N    

Bonds between two atoms of the molecule

Total Number of Bonds: 61


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CE1 CZ C C doub 1.38 N Y
2 CE1 CD1 C C sing 1.38 N Y
3 N CA N C sing 1.47 N N
4 CZ CE2 C C sing 1.38 N Y
5 CD1 CG C C doub 1.38 N Y
6 CE2 CD2 C C doub 1.38 N Y
7 CG CD2 C C sing 1.38 N Y
8 CG CB C C sing 1.51 N N
9 CA CB C C sing 1.53 N N
10 CA C C C sing 1.51 N N
11 O C O C doub 1.21 N N
12 C N3' C N sing 1.35 N N
13 N3' C3' N C sing 1.47 N N
14 C3' C2' C C sing 1.54 N N
15 C3' C4' C C sing 1.54 N N
16 O5' C5' O C sing 1.43 N N
17 O5' P O P sing 1.61 N N
18 C5' C4' C C sing 1.53 N N
19 OP1 P O P doub 1.48 N N
20 C2' O2' C O sing 1.43 N N
21 C2' C1' C C sing 1.55 N N
22 C4' O4' C O sing 1.44 N N
23 OP2 P O P sing 1.61 N N
24 C8 N7 C N doub 1.3 N Y
25 C8 N9 C N sing 1.36 N Y
26 C1' O4' C O sing 1.44 N N
27 C1' N9 C N sing 1.47 N N
28 N7 C5 N C sing 1.35 N Y
29 N9 C4 N C sing 1.37 N Y
30 C5 C4 C C doub 1.4 N Y
31 C5 C6 C C sing 1.4 N Y
32 C4 N3 C N sing 1.33 N Y
33 N6 C6 N C sing 1.38 N N
34 C6 N1 C N doub 1.33 N Y
35 N3 C2 N C doub 1.32 N Y
36 N1 C2 N C sing 1.32 N Y
37 P OP3 P O sing 1.61 N N
38 OP2 HOP2 O H sing 0.97 N N
39 C1' H1' C H sing 1.09 N N
40 C2' H2' C H sing 1.09 N N
41 O2' HO2' O H sing 0.97 N N
42 C3' H3' C H sing 1.09 N N
43 N3' H6 N H sing 0.97 N N
44 C4' H4' C H sing 1.09 N N
45 C5' H5' C H sing 1.09 N N
46 C5' H5'' C H sing 1.09 N N
47 C8 H8 C H sing 1.08 N N
48 N6 H61 N H sing 0.97 N N
49 N6 H62 N H sing 0.97 N N
50 C2 H2 C H sing 1.08 N N
51 CA HA C H sing 1.09 N N
52 N H N H sing 1.01 N N
53 CB HB3 C H sing 1.09 N N
54 CB HB2 C H sing 1.09 N N
55 CD1 HD1 C H sing 1.08 N N
56 CE1 HE1 C H sing 1.08 N N
57 CZ HZ C H sing 1.08 N N
58 CE2 HE2 C H sing 1.08 N N
59 CD2 HD2 C H sing 1.08 N N
60 OP3 HOP3 O H sing 0.97 N N
61 N H1 N H sing 1.01 N N