Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GIY    

Bonds between two atoms of the molecule

Total Number of Bonds: 60


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O25 N22 O N sing 1.42 N N
2 O21 C11 O C doub 1.21 N N
3 N22 C11 N C sing 1.35 N N
4 C31 N20 C N doub 1.32 N Y
5 C31 C34 C C sing 1.38 N Y
6 C11 C05 C C sing 1.51 N N
7 C33 O30 C O sing 1.43 N N
8 N20 C18 N C sing 1.33 N Y
9 C34 C35 C C doub 1.39 N Y
10 C28 C27 C C doub 1.38 N Y
11 C28 C24 C C sing 1.39 N Y
12 C27 C23 C C sing 1.38 N Y
13 C09 C08 C C doub 1.35 N Y
14 C09 N02 C N sing 1.35 N Y
15 N13 C17 N C sing 1.46 N N
16 N13 S01 N S sing 1.66 N N
17 O30 C24 O C sing 1.36 N N
18 C24 C29 C C doub 1.39 N Y
19 C17 C08 C C sing 1.51 N N
20 C05 C19 C C sing 1.53 N N
21 C05 N02 C N sing 1.47 N N
22 S06 C10 S C sing 1.76 N Y
23 S06 C04 S C sing 1.76 N Y
24 C23 C19 C C sing 1.51 N N
25 C23 C26 C C doub 1.38 N Y
26 C18 C10 C C sing 1.48 N N
27 C18 C32 C C doub 1.4 N Y
28 C08 N07 C N sing 1.34 N Y
29 N02 N03 N N sing 1.29 N Y
30 C35 C32 C C sing 1.38 N Y
31 C29 C26 C C sing 1.38 N Y
32 C10 C14 C C doub 1.35 N Y
33 O16 S01 O S doub 1.42 N N
34 S01 C04 S C sing 1.76 N N
35 S01 O15 S O doub 1.42 N N
36 C04 C12 C C doub 1.34 N Y
37 N03 N07 N N doub 1.29 N Y
38 C14 C12 C C sing 1.38 N Y
39 C17 H1 C H sing 1.09 N N
40 C17 H2 C H sing 1.09 N N
41 C26 H3 C H sing 1.08 N N
42 C28 H4 C H sing 1.08 N N
43 C05 H5 C H sing 1.09 N N
44 C09 H6 C H sing 1.08 N N
45 C12 H7 C H sing 1.08 N N
46 C14 H8 C H sing 1.08 N N
47 C19 H9 C H sing 1.09 N N
48 C19 H10 C H sing 1.09 N N
49 C27 H11 C H sing 1.08 N N
50 C29 H12 C H sing 1.08 N N
51 C31 H13 C H sing 1.08 N N
52 C32 H14 C H sing 1.08 N N
53 C33 H15 C H sing 1.09 N N
54 C33 H16 C H sing 1.09 N N
55 C33 H17 C H sing 1.09 N N
56 C34 H18 C H sing 1.08 N N
57 C35 H19 C H sing 1.08 N N
58 N13 H20 N H sing 0.97 N N
59 N22 H21 N H sing 0.97 N N
60 O25 H22 O H sing 0.97 N N