Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : GVX    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O18 C16 O C doub 1.21 N N
2 C15 C16 C C sing 1.51 N N
3 C15 N14 C N sing 1.46 N N
4 C16 O17 C O sing 1.34 N N
5 O13 C12 O C doub 1.21 N N
6 N14 C12 N C sing 1.35 N N
7 C12 C11 C C sing 1.51 N N
8 C19 C11 C C sing 1.53 N N
9 C19 S20 C S sing 1.81 N N
10 C11 N10 C N sing 1.46 N N
11 N10 C08 N C sing 1.35 N N
12 C29 C28 C C doub 1.38 N Y
13 C29 C30 C C sing 1.38 N Y
14 C28 C27 C C sing 1.38 N Y
15 S20 C21 S C sing 1.76 N N
16 C08 C07 C C sing 1.51 N N
17 C08 O09 C O doub 1.21 N N
18 C07 C06 C C sing 1.53 N N
19 C30 C31 C C doub 1.38 N Y
20 O03 C02 O C doub 1.21 N N
21 C27 C26 C C doub 1.38 N Y
22 N23 C21 N C sing 1.35 N N
23 N23 C24 N C sing 1.46 N N
24 C21 S22 C S doub 1.71 N N
25 C31 C26 C C sing 1.38 N Y
26 C26 C25 C C sing 1.51 N N
27 C02 C04 C C sing 1.51 N N
28 C02 O01 C O sing 1.34 N N
29 C04 C06 C C sing 1.53 N N
30 C04 N05 C N sing 1.47 N N
31 C24 C25 C C sing 1.53 N N
32 O01 H1 O H sing 0.97 N N
33 C04 H2 C H sing 1.09 N N
34 N05 H3 N H sing 1.01 N N
35 N05 H4 N H sing 1.01 N N
36 C06 H6 C H sing 1.09 N N
37 C06 H7 C H sing 1.09 N N
38 C07 H8 C H sing 1.09 N N
39 C07 H9 C H sing 1.09 N N
40 N10 H10 N H sing 0.97 N N
41 C11 H11 C H sing 1.09 N N
42 N14 H12 N H sing 0.97 N N
43 C15 H13 C H sing 1.09 N N
44 C15 H14 C H sing 1.09 N N
45 O17 H15 O H sing 0.97 N N
46 C19 H16 C H sing 1.09 N N
47 C19 H17 C H sing 1.09 N N
48 N23 H18 N H sing 0.97 N N
49 C24 H19 C H sing 1.09 N N
50 C24 H20 C H sing 1.09 N N
51 C25 H21 C H sing 1.09 N N
52 C25 H22 C H sing 1.09 N N
53 C27 H23 C H sing 1.08 N N
54 C28 H24 C H sing 1.08 N N
55 C29 H25 C H sing 1.08 N N
56 C30 H26 C H sing 1.08 N N
57 C31 H27 C H sing 1.08 N N