Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : HN8    

Bonds between two atoms of the molecule

Total Number of Bonds: 45


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C16 O2 C O sing 1.44 N N
2 C16 O3 C O sing 1.44 N N
3 O2 C13 O C sing 1.35 N N
4 O3 C14 O C sing 1.35 N N
5 C13 C14 C C doub 1.4 N Y
6 C13 C11 C C sing 1.39 N Y
7 C14 C12 C C sing 1.39 N Y
8 C11 C5 C C doub 1.39 N Y
9 C12 C8 C C doub 1.39 N Y
10 C5 C8 C C sing 1.38 N Y
11 C5 C1 C C sing 1.51 N N
12 C8 C6 C C sing 1.51 N N
13 C7 C1 C C sing 1.48 N N
14 C7 C10 C C doub 1.3 N N
15 C1 C3 C C sing 1.55 N N
16 C1 C2 C C sing 1.55 N N
17 C10 C9 C C sing 1.5 N N
18 C3 O4 C O sing 1.43 N N
19 C3 C4 C C sing 1.54 N N
20 C6 N1 C N sing 1.47 N N
21 O1 C15 O C sing 1.43 N N
22 O1 C9 O C sing 1.43 N N
23 C2 N1 C N sing 1.49 N N
24 C2 C17 C C sing 1.53 N N
25 C9 C17 C C sing 1.53 N N
26 N1 C4 N C sing 1.48 N N
27 C2 H1 C H sing 1.09 N N
28 C10 H2 C H sing 1.08 N N
29 C11 H3 C H sing 1.08 N N
30 C12 H4 C H sing 1.08 N N
31 C15 H5 C H sing 1.09 N N
32 C15 H6 C H sing 1.09 N N
33 C15 H7 C H sing 1.09 N N
34 C16 H8 C H sing 1.09 N N
35 C16 H9 C H sing 1.09 N N
36 C17 H10 C H sing 1.09 N N
37 C17 H11 C H sing 1.09 N N
38 C3 H12 C H sing 1.09 N N
39 C4 H13 C H sing 1.09 N N
40 C4 H14 C H sing 1.09 N N
41 C6 H15 C H sing 1.09 N N
42 C6 H16 C H sing 1.09 N N
43 C7 H17 C H sing 1.08 N N
44 C9 H18 C H sing 1.09 N N
45 O4 H20 O H sing 0.97 N N