Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J6J    

Bonds between two atoms of the molecule

Total Number of Bonds: 78


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C44 O43 C O sing 1.43 N N
2 C33 C31 C C sing 1.53 N N
3 C33 C32 C C sing 1.53 N N
4 F42 C37 F C sing 1.35 N N
5 O43 C24 O C sing 1.36 N N
6 C37 C38 C C doub 1.39 N Y
7 C37 C36 C C sing 1.39 N Y
8 C38 N39 C N sing 1.32 N Y
9 N39 C34 N C doub 1.32 N Y
10 C36 N35 C N doub 1.32 N Y
11 N35 C34 N C sing 1.32 N Y
12 C34 C31 C C sing 1.51 N N
13 C31 N28 C N sing 1.46 N N
14 C31 C32 C C sing 1.53 N N
15 N28 C27 N C sing 1.35 N N
16 C24 C23 C C doub 1.39 N Y
17 C24 C25 C C sing 1.4 N Y
18 C23 C22 C C sing 1.38 N Y
19 C27 C25 C C sing 1.48 N N
20 C27 O29 C O doub 1.22 N N
21 C25 C26 C C doub 1.39 N Y
22 C22 C20 C C doub 1.4 N Y
23 C26 C20 C C sing 1.39 N Y
24 C20 C7 C C sing 1.48 N N
25 N30 C40 N C sing 1.47 N N
26 N30 C8 N C sing 1.4 N N
27 C7 C8 C C doub 1.4 N Y
28 C7 C6 C C sing 1.39 N Y
29 C40 C41 C C sing 1.53 N N
30 C8 C9 C C sing 1.38 N Y
31 C6 C4 C C doub 1.39 N Y
32 C4 C5 C C sing 1.4 N Y
33 C4 C3 C C sing 1.48 N Y
34 C9 C5 C C doub 1.39 N Y
35 O11 C10 O C doub 1.22 N N
36 C5 O1 C O sing 1.35 N Y
37 C10 C3 C C sing 1.47 N N
38 C10 N12 C N sing 1.35 N N
39 C3 C2 C C doub 1.39 N Y
40 N12 C21 N C sing 1.46 N N
41 O1 C2 O C sing 1.34 N Y
42 C2 C13 C C sing 1.48 N N
43 C13 C18 C C doub 1.4 N Y
44 C13 C14 C C sing 1.4 N Y
45 C18 C17 C C sing 1.38 N Y
46 C14 C15 C C doub 1.38 N Y
47 C17 C16 C C doub 1.39 N Y
48 C15 C16 C C sing 1.39 N Y
49 C16 F19 C F sing 1.35 N N
50 C18 H51 C H sing 1.08 N N
51 C17 H50 C H sing 1.08 N N
52 C15 H49 C H sing 1.08 N N
53 C21 H54 C H sing 1.09 N N
54 C21 H52 C H sing 1.09 N N
55 C21 H53 C H sing 1.09 N N
56 C22 H55 C H sing 1.08 N N
57 C23 H56 C H sing 1.08 N N
58 C33 H62 C H sing 1.09 N N
59 C33 H63 C H sing 1.09 N N
60 C6 H45 C H sing 1.08 N N
61 C9 H46 C H sing 1.08 N N
62 N12 H47 N H sing 0.97 N N
63 C14 H48 C H sing 1.08 N N
64 C26 H57 C H sing 1.08 N N
65 N28 H58 N H sing 0.97 N N
66 N30 H59 N H sing 0.97 N N
67 C32 H60 C H sing 1.09 N N
68 C32 H61 C H sing 1.09 N N
69 C36 H64 C H sing 1.08 N N
70 C38 H65 C H sing 1.08 N N
71 C40 H67 C H sing 1.09 N N
72 C40 H66 C H sing 1.09 N N
73 C41 H69 C H sing 1.09 N N
74 C41 H68 C H sing 1.09 N N
75 C41 H70 C H sing 1.09 N N
76 C44 H71 C H sing 1.09 N N
77 C44 H72 C H sing 1.09 N N
78 C44 H73 C H sing 1.09 N N