Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : KP9    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OD C4D O C doub 1.22 N N
2 CBD CAD C C doub 1.33 N N
3 O1C CGC O C doub 1.22 N N
4 C4D C3D C C sing 1.47 N N
5 C4D ND C N sing 1.34 N N
6 CAD C3D C C sing 1.48 N N
7 CGC O2C C O sing 1.35 N N
8 CGC CBC C C sing 1.42 N N
9 C3D C2D C C doub 1.34 N N
10 ND C1D N C sing 1.47 N N
11 CMC C3C C C sing 1.51 N N
12 CBC CAC C C doub 1.36 E N
13 CAC C2C C C sing 1.46 N N
14 C3C C2C C C doub 1.4 N N
15 C3C C4C C C sing 1.39 N N
16 C2D C1D C C sing 1.51 N N
17 C2D CMD C C sing 1.51 N N
18 C2C C1C C C sing 1.47 N N
19 C1D CHC C C sing 1.53 N N
20 O2B CGB O C doub 1.21 N N
21 C4C CHC C C sing 1.51 N N
22 C4C NC C N doub 1.31 N N
23 C1C NC C N sing 1.34 N N
24 C1C CHB C C doub 1.4 Z N
25 CHB C4B C C sing 1.4 N N
26 CGB O1B C O sing 1.34 N N
27 CGB CBB C C sing 1.51 N N
28 C4B NB C N sing 1.38 N Y
29 C4B C3B C C doub 1.4 N Y
30 CBB CAB C C sing 1.53 N N
31 CAB C3B C C sing 1.51 N N
32 NB C1B N C sing 1.37 N Y
33 C3B C2B C C sing 1.38 N Y
34 C1B C2B C C doub 1.39 N Y
35 C1B CHA C C sing 1.41 N N
36 C2B CMB C C sing 1.51 N N
37 CHA C4A C C doub 1.38 Z N
38 C4A NA C N sing 1.39 N N
39 C4A C3A C C sing 1.42 N N
40 NA C1A N C sing 1.35 N N
41 C3A CAA C C sing 1.51 N N
42 C3A C2A C C doub 1.36 N N
43 C1A OA C O doub 1.22 N N
44 C1A C2A C C sing 1.42 N N
45 CAA CBA C C sing 1.53 N N
46 C2A CMA C C sing 1.51 N N
47 CBB HBB2 C H sing 1.09 N N
48 CBB HBB1 C H sing 1.09 N N
49 CBA HBA3 C H sing 1.09 N N
50 CBA HBA2 C H sing 1.09 N N
51 CBA HBA1 C H sing 1.09 N N
52 CBC HBC1 C H sing 1.08 N N
53 NB HNB N H sing 0.97 N N
54 ND HND N H sing 0.97 N N
55 C1D H1D1 C H sing 1.09 N N
56 CAA HAA2 C H sing 1.09 N N
57 CAA HAA1 C H sing 1.09 N N
58 CAB HAB1 C H sing 1.09 N N
59 CAB HAB2 C H sing 1.09 N N
60 CAC HAC1 C H sing 1.08 N N
61 CAD HAD1 C H sing 1.08 N N
62 CBD HBD1 C H sing 1.08 N N
63 CBD HBD2 C H sing 1.08 N N
64 CHA HHA1 C H sing 1.08 N N
65 CHB HHB1 C H sing 1.08 N N
66 CHC HHC2 C H sing 1.09 N N
67 CHC HHC1 C H sing 1.09 N N
68 CMA HMA3 C H sing 1.09 N N
69 CMA HMA2 C H sing 1.09 N N
70 CMA HMA1 C H sing 1.09 N N
71 CMB HMB2 C H sing 1.09 N N
72 CMB HMB3 C H sing 1.09 N N
73 CMB HMB1 C H sing 1.09 N N
74 CMC HMC1 C H sing 1.09 N N
75 CMC HMC3 C H sing 1.09 N N
76 CMC HMC2 C H sing 1.09 N N
77 CMD HMD1 C H sing 1.09 N N
78 CMD HMD2 C H sing 1.09 N N
79 CMD HMD3 C H sing 1.09 N N
80 NA HNA N H sing 0.97 N N
81 O1B HO1B O H sing 0.97 N N
82 O2C HO2C O H sing 0.97 N N