Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : L5A    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O16 C09 O C doub 1.21 N N
2 C06 C01 C C doub 1.38 N Y
3 C06 C05 C C sing 1.38 N Y
4 C11 C08 C C sing 1.53 N N
5 C11 C14 C C sing 1.54 N N
6 C11 C10 C C sing 1.54 N N
7 C07 C05 C C sing 1.51 N N
8 C07 C10 C C sing 1.53 N N
9 C09 C08 C C sing 1.51 N N
10 C09 O15 C O sing 1.34 N N
11 C14 C13 C C sing 1.55 N N
12 C01 C02 C C sing 1.38 N Y
13 C13 C12 C C sing 1.55 N N
14 C12 C10 C C sing 1.54 N N
15 C05 C04 C C doub 1.38 N Y
16 C02 C17 C C sing 1.51 N N
17 C02 C03 C C doub 1.38 N Y
18 C04 C03 C C sing 1.38 N Y
19 C17 C18 C C sing 1.51 N N
20 O19 C18 O C doub 1.21 N N
21 C18 O20 C O sing 1.34 N N
22 C10 H1 C H sing 1.09 N N
23 C11 H2 C H sing 1.09 N N
24 C12 H3 C H sing 1.09 N N
25 C12 H4 C H sing 1.09 N N
26 C01 H5 C H sing 1.08 N N
27 C03 H6 C H sing 1.08 N N
28 C04 H7 C H sing 1.08 N N
29 C06 H8 C H sing 1.08 N N
30 C07 H9 C H sing 1.09 N N
31 C07 H10 C H sing 1.09 N N
32 C08 H11 C H sing 1.09 N N
33 C08 H12 C H sing 1.09 N N
34 C13 H13 C H sing 1.09 N N
35 C13 H14 C H sing 1.09 N N
36 C14 H15 C H sing 1.09 N N
37 C14 H16 C H sing 1.09 N N
38 C17 H17 C H sing 1.09 N N
39 C17 H18 C H sing 1.09 N N
40 O15 H19 O H sing 0.97 N N
41 O20 H20 O H sing 0.97 N N