Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : L5F    

Bonds between two atoms of the molecule

Total Number of Bonds: 79


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O44 C43 O C doub 1.21 N N
2 C18 C19 C C sing 1.53 N N
3 C18 N17 C N sing 1.47 N N
4 O1 C43 O C sing 1.34 N N
5 C19 O20 C O sing 1.43 N N
6 C43 C42 C C sing 1.51 N N
7 C12 C11 C C doub 1.37 N Y
8 C12 C13 C C sing 1.39 N Y
9 N17 C13 N C sing 1.37 N Y
10 N17 N16 N N sing 1.4 N Y
11 O20 C21 O C sing 1.43 N N
12 C11 C10 C C sing 1.39 N Y
13 C13 C14 C C doub 1.41 N Y
14 N16 N15 N N doub 1.29 N Y
15 C42 C41 C C sing 1.53 N N
16 C21 C22 C C sing 1.53 N N
17 C10 C41 C C sing 1.51 N N
18 C10 C9 C C doub 1.37 N Y
19 C14 N15 C N sing 1.35 N Y
20 C14 C9 C C sing 1.4 N Y
21 C41 C40 C C sing 1.51 N N
22 C9 C8 C C sing 1.51 N N
23 C22 O23 C O sing 1.43 N N
24 O23 C25 O C sing 1.35 N N
25 C40 C39 C C sing 1.38 N Y
26 C40 C35 C C doub 1.38 N Y
27 C39 C38 C C doub 1.38 N Y
28 C35 C36 C C sing 1.38 N Y
29 C25 C24 C C sing 1.39 N Y
30 C25 C26 C C doub 1.39 N Y
31 C24 C29 C C doub 1.38 N Y
32 C32 C33 C C sing 1.53 N N
33 C26 C27 C C sing 1.38 N Y
34 C38 C33 C C sing 1.5 N N
35 C38 C37 C C sing 1.38 N Y
36 C29 C30 C C sing 1.52 N N
37 C29 C28 C C sing 1.39 N Y
38 C36 C37 C C doub 1.38 N Y
39 C30 N31 C N sing 1.47 N N
40 C33 N31 C N sing 1.46 N N
41 C27 C28 C C doub 1.39 N Y
42 C37 C34 C C sing 1.51 N N
43 C28 O7 C O sing 1.35 N N
44 N31 S6 N S sing 1.66 N N
45 O7 S6 O S sing 1.51 N N
46 S6 O5 S O doub 1.42 N N
47 S6 O4 S O doub 1.42 N N
48 C8 H81 C H sing 1.09 N N
49 C8 H82 C H sing 1.09 N N
50 C8 H83 C H sing 1.09 N N
51 O1 H1 O H sing 0.97 N N
52 C11 H11 C H sing 1.08 N N
53 C12 H12 C H sing 1.08 N N
54 C18 H182 C H sing 1.09 N N
55 C18 H181 C H sing 1.09 N N
56 C19 H191 C H sing 1.09 N N
57 C19 H192 C H sing 1.09 N N
58 C21 H211 C H sing 1.09 N N
59 C21 H212 C H sing 1.09 N N
60 C22 H221 C H sing 1.09 N N
61 C22 H222 C H sing 1.09 N N
62 C24 H24 C H sing 1.08 N N
63 C26 H26 C H sing 1.08 N N
64 C27 H27 C H sing 1.08 N N
65 C30 H301 C H sing 1.09 N N
66 C30 H302 C H sing 1.09 N N
67 C32 H323 C H sing 1.09 N N
68 C32 H321 C H sing 1.09 N N
69 C32 H322 C H sing 1.09 N N
70 C33 H33 C H sing 1.09 N N
71 C34 H342 C H sing 1.09 N N
72 C34 H343 C H sing 1.09 N N
73 C34 H341 C H sing 1.09 N N
74 C35 H35 C H sing 1.08 N N
75 C36 H36 C H sing 1.08 N N
76 C39 H39 C H sing 1.08 N N
77 C41 H41 C H sing 1.09 N N
78 C42 H422 C H sing 1.09 N N
79 C42 H421 C H sing 1.09 N N