Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : N5N    

Bonds between two atoms of the molecule

Total Number of Bonds: 76


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C sing 1.46 N N
2 N1 C3 N C sing 1.35 N N
3 N1 C4 N C sing 1.46 N N
4 C2 C5 C C sing 1.53 N N
5 C2 C6 C C sing 1.53 N N
6 C3 C7 C C sing 1.51 N N
7 C3 O8 C O doub 1.21 N N
8 C4 C9 C C sing 1.51 N N
9 C5 C6 C C sing 1.53 N N
10 C7 N10 C N sing 1.46 N N
11 C7 C11 C C sing 1.53 N N
12 C9 O12 C O sing 1.34 N N
13 C9 O13 C O doub 1.21 N N
14 N10 S14 N S sing 1.66 N N
15 C11 C15 C C sing 1.51 N N
16 S14 C16 S C sing 1.76 N N
17 S14 O17 S O doub 1.42 N N
18 S14 O18 S O doub 1.42 N N
19 C15 N19 C N sing 1.35 N N
20 C15 O20 C O doub 1.21 N N
21 C16 C21 C C sing 1.36 N Y
22 C16 C22 C C doub 1.39 N Y
23 N19 C23 N C sing 1.47 N N
24 C21 C24 C C doub 1.41 N Y
25 C22 C25 C C sing 1.36 N Y
26 C23 C26 C C sing 1.53 N N
27 C24 C27 C C sing 1.42 N Y
28 C24 C28 C C sing 1.41 N Y
29 C25 C27 C C doub 1.4 N Y
30 C26 C29 C C sing 1.53 N N
31 C26 C30 C C sing 1.53 N N
32 C27 C31 C C sing 1.41 N Y
33 C28 C32 C C doub 1.36 N Y
34 C29 N33 C N sing 1.47 N N
35 C30 C34 C C sing 1.53 N N
36 C31 C35 C C doub 1.36 N Y
37 C32 C35 C C sing 1.39 N Y
38 N33 C36 N C sing 1.47 N N
39 N33 C37 N C sing 1.37 N N
40 C34 C36 C C sing 1.53 N N
41 C37 N38 C N sing 1.38 N N
42 C37 N39 C N doub 1.3 N N
43 C2 H2 C H sing 1.09 N N
44 C4 H41C C H sing 1.09 N N
45 C4 H42C C H sing 1.09 N N
46 C5 H51C C H sing 1.09 N N
47 C5 H52C C H sing 1.09 N N
48 C6 H61C C H sing 1.09 N N
49 C6 H62C C H sing 1.09 N N
50 C7 H7 C H sing 1.09 N N
51 N10 H10 N H sing 0.97 N N
52 C11 H111 C H sing 1.09 N N
53 C11 H112 C H sing 1.09 N N
54 O12 H12 O H sing 0.97 N N
55 N19 H19 N H sing 0.97 N N
56 C21 H21 C H sing 1.08 N N
57 C22 H22 C H sing 1.08 N N
58 C23 H231 C H sing 1.09 N N
59 C23 H232 C H sing 1.09 N N
60 C25 H25 C H sing 1.08 N N
61 C26 H26 C H sing 1.09 N N
62 C28 H28 C H sing 1.08 N N
63 C29 H291 C H sing 1.09 N N
64 C29 H292 C H sing 1.09 N N
65 C30 H301 C H sing 1.09 N N
66 C30 H302 C H sing 1.09 N N
67 C31 H31 C H sing 1.08 N N
68 C32 H32 C H sing 1.08 N N
69 C34 H341 C H sing 1.09 N N
70 C34 H342 C H sing 1.09 N N
71 C35 H35 C H sing 1.08 N N
72 C36 H361 C H sing 1.09 N N
73 C36 H362 C H sing 1.09 N N
74 N38 H381 N H sing 0.97 N N
75 N38 H382 N H sing 0.97 N N
76 N39 H39 N H sing 0.97 N N